Gene Pnap_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1966 
Symbol 
ID4687188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2088599 
End bp2089141 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID639834974 
Producthypothetical protein 
Protein accessionYP_982196 
Protein GI121604867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.45855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCA CCGACAGCCC CGTTCTCAGC CTGCGCGTGA AGGCCCTGGC GGCCTTGTAC 
CAGCACATTG CCAGCACGCG CATGCAAGGC ATTCCGCTGC TGAACCCTGC CGTGCAGGTG
GAGGCCGTGG GGTTTGAGCT GGTCAAGCCG GAGGGCAACG AGCCCGAAAC CACTGGCATC
GGCGTGCTTA TCACGCCCTG GTTCATGAAC CTGGTCTGGC TGCCGCTGCG GCGACTGGAC
CTCGCGAAGC AGGTGGGAAG CAAGGTTCCG CGCTACGTCG GGCGCGAATG TTTCGAGTTC
ATTGCTGCGC ACGAAGACGG CTTTGGCAGC TATGAAGCCT GTTCCTTGTT CTCCCCGGTG
TTTGAGTTTG AAAATCACCA GGCCGCCGTG GCCACGGCCC AGGCCGTGCT GGACACGCTG
CGGCAACCGG CGAGCGCTGC GGCCCAGGCG GTCTTGCCGC AAGCCCCTGC GCGCCGCGCC
TTCCTCTTCG GGCGATCCAG CGCCGTGGCT GCGCCCGGCA GACTGGAGGC TGGCCGTGGC
TGA
 
Protein sequence
MHSTDSPVLS LRVKALAALY QHIASTRMQG IPLLNPAVQV EAVGFELVKP EGNEPETTGI 
GVLITPWFMN LVWLPLRRLD LAKQVGSKVP RYVGRECFEF IAAHEDGFGS YEACSLFSPV
FEFENHQAAV ATAQAVLDTL RQPASAAAQA VLPQAPARRA FLFGRSSAVA APGRLEAGRG