Gene Pnap_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1964 
Symbol 
ID4687413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2087094 
End bp2087441 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content67% 
IMG OID639834972 
Producthydrogenase expression/synthesis, HypA 
Protein accessionYP_982194 
Protein GI121604865 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAG CCAGCCTGGC CGGCGGAATC TTGAAGCTGG TCGAAGATGC CGCACGGCGC 
GAGGCCTTTC AGCGCGTGAC CGTGCTGCGG CTGGAAGTCG GCCAACTGGC CGGCGTCGAG
TTGCGCGCGC TGAAGTTCGC GCTCGAAGCG ATTGCGCCGG GCACCGCGCT GGACGGCGCA
CGCCTGGAGT TTGAAGAGCC CGCCGGGCAG GCCTGGTGCA TGGCCTGCAG CCAGACCGTG
CCTTTGGCGG CGCGCGGCAT GGCCTGCACG GGCTGCGGCA GTTACCAGTT GCAGCCCACC
GGCGGCACTG AATTGCGTGT GATGGATATG TTGGTAGCCG ACGAATAA
 
Protein sequence
MHEASLAGGI LKLVEDAARR EAFQRVTVLR LEVGQLAGVE LRALKFALEA IAPGTALDGA 
RLEFEEPAGQ AWCMACSQTV PLAARGMACT GCGSYQLQPT GGTELRVMDM LVADE