| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1960 |
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| Symbol | |
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| ID | 4687348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2083482 |
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| End bp | 2084627 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834968 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_982190 |
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| Protein GI | 121604861 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA TCGACGAATT CCGCGATGGC GACATCGCCC GCAAGATCGG CGCCCGGCTG
GCCGAGGAAG TGCAGCCCGC ACGCCAGTAC AGTTTCATGG AGTTTTGCGG CGGCCACACC
CACGCCATTT CACGCTACGG CATCGCCGAA ATGCTGCCGC CCAATGTGCG CATGGTGCAT
GGCCCCGGCT GCCCGGTGTG CGTGCTGCCG ATTGGCCGCA TCGACCTGGC CATCAAGCTG
GCGCTGGAGT TTGGCGTGAT TGTCTGCACC TACGGCGACA CCATGCGCGT GCCCGCCTCC
AACAGCCTGT CGCTGGTCAA GGCCAAGGCG CGCGGCGGCG ACATCCGCAT GGTCTATTCG
GCCGCCGACG CGCTGGAAAT CGCCCGCCAG AATCCCGAGC GCGAAGTGGT CTTTTTTGCC
ATCGGCTTTG AAACCACCAC GCCGCCCACC GCGCTGGCGA TTCGCGACGC GCAGCGGGCG
CAGCTGAAAA ACTTCAGCGT GCTGTGCTGC CATGTGCTCA CGCCCTCGGC CATCACCCAT
ATCCTGGAGT CGCCCGAGGT GCGCCAGTAC GGCACGGTGC CGATTGACGG CTTTGTCGGG
CCGGCCCATG TCAGCATCGT GATTGGCTCG CAGCCCTACG AGCATTTCTC GGACGAATAC
CGCAAGCCGG TGGTGATCGC CGGCTTCGAG CCGCTCGATG TGATGCAGGC GGTGCTGATG
CTGGTGCGCC AGGTCAATGA AGGACGGGCC GAGGTGGAAA ACGAATTTTC CCGCGTGGTC
TCGCGTGAGG GCAATTTGCA GGCCCAAGCA CTGGTGTCGG AGATTTTCGA ACTGCGCACA
ACGTTCGAGT GGCGCGGGCT GGGCGAAGTG CCCTACAGCG CGCTGAAGAT CAGGCCCAGC
TATGCGCAGT TTGACGCTGA ATGCCGCTTT GACCTGCGCT ACCAGCCGGT GGCCGACAAC
AAGGCCTGCG AGTGCGGAGC GATTCTTCGC GGCGTCAAAA AACCGACCGA CTGCAAGATT
TTTGGCACCG TCTGCACGCC GGAAAACCCG GTGGGCTCGT GCATGGTGTC CAGCGAAGGG
GCCTGCGCCG CCCATTATTC ATACGGCCGT TTCCGGGATA TTCCCGTCGT GGTGGAATCA
ATATGA
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| Protein sequence | MKYIDEFRDG DIARKIGARL AEEVQPARQY SFMEFCGGHT HAISRYGIAE MLPPNVRMVH
GPGCPVCVLP IGRIDLAIKL ALEFGVIVCT YGDTMRVPAS NSLSLVKAKA RGGDIRMVYS
AADALEIARQ NPEREVVFFA IGFETTTPPT ALAIRDAQRA QLKNFSVLCC HVLTPSAITH
ILESPEVRQY GTVPIDGFVG PAHVSIVIGS QPYEHFSDEY RKPVVIAGFE PLDVMQAVLM
LVRQVNEGRA EVENEFSRVV SREGNLQAQA LVSEIFELRT TFEWRGLGEV PYSALKIRPS
YAQFDAECRF DLRYQPVADN KACECGAILR GVKKPTDCKI FGTVCTPENP VGSCMVSSEG
ACAAHYSYGR FRDIPVVVES I
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