| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1953 |
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| Symbol | |
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| ID | 4686652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2074750 |
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| End bp | 2076126 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834961 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_982183 |
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| Protein GI | 121604854 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT CATCAAACCC TGACGCTGCC CACGGCCGGC CGCCCGGTCT GGAAAGCCTG
ATGCCGGGCA ACGCCATGGA GGGCCTGGAC GAGTCCACCT GGGTGGACGT GATCCAGAAA
ATGGACGAGG TGTATTCGCA GCTCATCGAC GACGAAATCG AACTGGAGAA GAAAAATGCC
GAGCTGGAGC AGTCCCAGCA GTTCATCCTC AGCGTGCTCT CGGCCATGTC CGACGTGCTG
CTGGTGTGCA ACGAGCGCGG CGTGATCGAG GAAACCAATG CCGCGCTGTG CGAGCTGGTG
GGCCGCGCCG AGGCCGACCT GCACGGCACC TCCTTTTATG ACCTGCTGGC CGACTCCGTC
AGCGTGGAGC GGGCGCGCAC CGTGCTGGAC AACACCAACC CGCCGCGCCG GGGCGAAGGA
CTGGAGCTGA ACCTGCTCGA TGCGCAGGGC CAGAGCGTAC CGGTCGATGC CAATTGCACC
CCGCGCGTGG GCGCCAACGG GCGCCGCGTG GGCACGGTGT TCGTGGCCCG GCCCACGGCC
GAGATCAAGC GCGCCTACCA TGAGCTGCGC AGCGCCCATG AAGCCCTCAA GCGCGCCCAG
CAGCAACTGC TGCATTCCGA AAAGATGGCC TCGCTGGGCC GCCTGGTGGC CGGCGTGGCG
CATGAACTCA ACAACCCCAT CAGTTTTGTA CTGGGCAACG TGCATGCGCT GAGCCGCTAT
TGCGACCGCC TGCGCCAGTA CGTGGCGGCC GTGCATGCGG GCGAAAGCAG CGAACAGCTC
GAAGAACTGC GTGCCAGGCT GCGCATCGAC CACATGCTGA ATGATCTGCC GTCGCTCATC
GAAGGCACGC TGGAAGGCGC CCAGCGCACG GCCAATATTG TCAATGGGCT CAAGCGTTTT
TCCGCCATGG ACCCGGAAGC CCGGGTGCCG GTCGATTTGA ATGAGGTCAT CAAGCGCGCC
ATTCACTGGG TCGGCAAAGG CGCAGCCCCC AGTTTTCAGG TGAAATGGCA GCCTGGACCT
CCTTTGACGG TGACGGGCAG TTCTGGCCAA CTGCAGCAGG TCTTGATGAA CCTCTTGCAA
AACGCACAAG ACGCGATGAC AGGCAATGCC AATGCGGAAA AAGTGGTATG GATTGATACC
GAATCCGCCG GGAATCGTGT GCGCCTGCGG CTTCGTGACA ACGGCCCGGG CATAGCGGCA
GAACATCTGT CACATATTTT TGATCCGTTT TTCACCACCA AGCCCGTGGG CAAGGGAACT
GGCCTGGGCC TGTCGATCAG CTATGGCATC GTGGAACAGC ACGGTGGCGT GTTGAGCGCA
AGCAACCACC CTGGTGGTGG CGCCGAGTTC TTGCTTGAAC TGCCTGTTGC CTCCTGA
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| Protein sequence | MPASSNPDAA HGRPPGLESL MPGNAMEGLD ESTWVDVIQK MDEVYSQLID DEIELEKKNA
ELEQSQQFIL SVLSAMSDVL LVCNERGVIE ETNAALCELV GRAEADLHGT SFYDLLADSV
SVERARTVLD NTNPPRRGEG LELNLLDAQG QSVPVDANCT PRVGANGRRV GTVFVARPTA
EIKRAYHELR SAHEALKRAQ QQLLHSEKMA SLGRLVAGVA HELNNPISFV LGNVHALSRY
CDRLRQYVAA VHAGESSEQL EELRARLRID HMLNDLPSLI EGTLEGAQRT ANIVNGLKRF
SAMDPEARVP VDLNEVIKRA IHWVGKGAAP SFQVKWQPGP PLTVTGSSGQ LQQVLMNLLQ
NAQDAMTGNA NAEKVVWIDT ESAGNRVRLR LRDNGPGIAA EHLSHIFDPF FTTKPVGKGT
GLGLSISYGI VEQHGGVLSA SNHPGGGAEF LLELPVAS
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