Gene Pnap_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1952 
Symbol 
ID4686670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2074065 
End bp2074736 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID639834960 
Productankyrin 
Protein accessionYP_982182 
Protein GI121604853 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAT CCATTCCCGG CTACCTCAGG AAACTGTCTT TCCTGCTGGT TTTTGCAGGC 
GCTGGCTTGG CGCATGCCGG CTCCTACGAT GATTTTTTCA ATGCCATCAA GCAAGACAAT
GCAGGCAAGA TCAAGGAACT TCTTGTCCGG GGTTTTGACG CCAATACAAC AGACGCCAAG
AGCCAGACCG GGTTGTACCT TGCATTGAGG GAGCCCTCGC CAAAGGCTGC ACAGGTTTTG
ATCGAATGGA ACAAAACCGA TGTGAACAAA CTCAATGCGC AGGGAGAAAG CGCATTGATG
CTGGCAGCAC TCAAGGGACA ACTGGAATGG GCTGACAAAC TGATCAAAAA AGGCGCGGAC
GTCAACAAAA CCGGATGGAC GCCTCTGCAT TACGCCGCTA GCAGTGGACA GGTTGCGATC
ATCAGCTTGC TGCTGGAAAG CAGCGCGTAC ATAGACGCCG AGTCGCCGAA CGGCAGCACG
CCACTGATGA TGGCCGCAAT GTACGGTTCA GCAGCATCCG TTAAATTATT GCTCCAGGAA
GGCGCCGATC CGAAGCTCAA AAACCAACAA GGATTGACGG CGCTGGATTT TGCGCAACGC
AGCAATCGGC CTGATGCCGT GGAAGCGATT GCCGCAGCCA TAAGAAGCAA ACGGCCAAGC
GGCAAGTGGT AA
 
Protein sequence
MTASIPGYLR KLSFLLVFAG AGLAHAGSYD DFFNAIKQDN AGKIKELLVR GFDANTTDAK 
SQTGLYLALR EPSPKAAQVL IEWNKTDVNK LNAQGESALM LAALKGQLEW ADKLIKKGAD
VNKTGWTPLH YAASSGQVAI ISLLLESSAY IDAESPNGST PLMMAAMYGS AASVKLLLQE
GADPKLKNQQ GLTALDFAQR SNRPDAVEAI AAAIRSKRPS GKW