| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1948 |
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| Symbol | tmk |
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| ID | 4686399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2070935 |
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| End bp | 2071717 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834956 |
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| Product | thymidylate kinase |
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| Protein accession | YP_982178 |
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| Protein GI | 121604849 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.98603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCCA CGCTTGTCGC TTCGCGTACT ACGCTGCCCC CCGAGGGGGC TGGCCTTGCT
TTGGGCGGCC CGGCGCGGCG GCCTTCGCAT TCCCAGGGCT TGTTCATCAG TTTTGAAGGC
ATCGACGGCG CCGGAAAATC GACGCACATC GCCGGTCTGG CCGACGCCTT CCAATCCGAG
GGCCGGGCAG TGACCCTGAC GCGCGAGCCG GGCGGCACCT TGCTGGCCGA AAAACTGCGC
AACATGGTGC TGGACGATGC CATGGACCCG CTGACCGAGT CGCTGCTGAT TTTTGCCGCC
CGGCGCGACC ACCTGGTGCG CGTGATTGCG CCGGCCCTGC TGCGCGGCGA TGTGGTGCTG
TGCGACCGCT TCACCGACGC GACCTTTGCC TATCAGGGCG CGGGGCGCGG CTTTGATGTG
AAGGTGCTGG CGACGCTGGA GCGCTGGGTG CAGTCCGGTG AAGGCCTGCT GGGCGACCCG
GCCGGCAACC AGCCGATGAA GCCCGAAGTC GAAACCGTCA TCGAGCCCCA CCTGACGGTC
TGGTTCGACC TGCCGCCCGA AGAAGCCGCC CTGCGCCTGG CGGACAGCCG CGTCCCCGAC
AGGTTCGAGT CGCAGCCGGT GGAGTTTTTC CGCCGTGTTG CCAGGGGCTA CGCCGAGCGC
CAGCTTGGCC ATCCCGAACG CTTTGCCCGG ATTGACGCCT CGCAAAACCG CGAAGCCGTA
TGGCAGGGCA TCCGGCAGGT GTTTGTCGAA AAGGGATGGC TGCAAGCCGC TGCCTTGCCA
TGA
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| Protein sequence | MTPTLVASRT TLPPEGAGLA LGGPARRPSH SQGLFISFEG IDGAGKSTHI AGLADAFQSE
GRAVTLTREP GGTLLAEKLR NMVLDDAMDP LTESLLIFAA RRDHLVRVIA PALLRGDVVL
CDRFTDATFA YQGAGRGFDV KVLATLERWV QSGEGLLGDP AGNQPMKPEV ETVIEPHLTV
WFDLPPEEAA LRLADSRVPD RFESQPVEFF RRVARGYAER QLGHPERFAR IDASQNREAV
WQGIRQVFVE KGWLQAAALP
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