| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1946 |
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| Symbol | |
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| ID | 4687585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2068883 |
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| End bp | 2069836 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834954 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_982176 |
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| Protein GI | 121604847 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA CCAGCCCAAC GCCACCTATT TCGGGCATTG TCCAATTGAC GCATCTCGGG
CTCATTCGGG CCGCCGGCGA GGATGCGGTG AAATTCTTGC AAAGCCAGTT GACGCAGGAC
GTGGCGTTGA TGGACTTGAC GCAAGCCCAT CTGGCGGCAT TTTGCAATGC CAAGGGCCGG
ATGCAGGCCA GCTTTATTCT GTTCAAACGC AGCCAGGAGG AAGTTTTACT GGTCTGCAGC
CGTGACATTC TGGCGGCAAC GCTCAAGCGC CTGTCGATGT TTGTGATGCG CGCCAAGGCA
AAACTGAGCG ATGCCAGCGA CGAGTTCTCG CTCTATGGCG TGGCGGGCAG CGCTATTGAA
TCCATGGCTG GTAGCACACG GCCTGCCTGG ACCAAAGCTG ATATTGGCGA TGCAAACATG
GTCTTTCTTT ATCCCGGCGC CGGCCAGTTG CGCGCGCTGT GGTGCGCGCC TGCCGCCTCG
CCCGCGCCCC AGGCGGCAGG CATTGATCTG GAAACCTGGA ACTGGCTTGA AGTGCAGTCG
GGCATCGCCA TGATCACCCA GCCGATTTTT GAAGCTTTTG TGCCGCAAAT GCTCAACTAC
GAGTCAGTGG GCGGCGTGAA CTTCAAGAAA GGCTGCTATC CGGGCCAGGA AATCGTGGCG
CGCAGCCAGT ACCGCGGCAC GCTCAAGCGG CGCGCCTGCC TGGTGCATGC CGATGCAGCG
CCTGCCGTCG GGCAGGAAGT GTTTCATATA AAGGATGCCG AGCAGCCTTG CGGACTGGTG
GCGGCGGCGG CGGCGAATCC GGCCGGCGGT TTTGACGCGA TTGTGTCGAT ACAGACCTCT
GCGGCGGCTG ATGCGGCGGA ACATGCCGGT GAGAAGCGCC TGACTTTGGG CAGTTCAACA
GGCGCGGCCC TGGCGCTGCT GCCGCTGCCC TACCCTTTGC TGGCTGATAT TTAA
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| Protein sequence | MTLTSPTPPI SGIVQLTHLG LIRAAGEDAV KFLQSQLTQD VALMDLTQAH LAAFCNAKGR
MQASFILFKR SQEEVLLVCS RDILAATLKR LSMFVMRAKA KLSDASDEFS LYGVAGSAIE
SMAGSTRPAW TKADIGDANM VFLYPGAGQL RALWCAPAAS PAPQAAGIDL ETWNWLEVQS
GIAMITQPIF EAFVPQMLNY ESVGGVNFKK GCYPGQEIVA RSQYRGTLKR RACLVHADAA
PAVGQEVFHI KDAEQPCGLV AAAAANPAGG FDAIVSIQTS AAADAAEHAG EKRLTLGSST
GAALALLPLP YPLLADI
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