| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1940 |
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| Symbol | |
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| ID | 4686522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2061041 |
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| End bp | 2062342 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834949 |
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| Product | PHB depolymerase family esterase |
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| Protein accession | YP_982171 |
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| Protein GI | 121604842 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGCA ATGCTTTAAA AAGATGCAAA GCCCCGGCCG TTTTTGCACG GCCGCTGGCT
TTCACCTTAT TCGTCTTCTC ATCAAGCCAA GGAACCATGA CAAAAAGTCT GACCAGCCTC
TGGCTGAAAA ATCTGCGCCG CGTCGGCAAG GTACAGCAGG CGCAGGGCCG CAAGCTCTTC
AAAAGCCTGC TGACCCCCGT CGTTCGCGCG CCGGTGGCAA AGCGTGCCAA GGCCGCCAAA
ACCATCCGCC CGATCACCCT CAAGAACATC AAGGCCGTCA AGGCACCGGC TTCCAAAGCT
GCCAAGCCGC GCCGCAAGCC AGCCGCCGCT CCCGCCCAGC CCGCCGCCAG CGTGCTGCCG
CTCCTGCCCG GAAGCTGGAA AAAATCGTTT TTCACGCTGC CGGGAACGGG GCTGGCTTCG
GCCCGCCGCA TGCTCTACTG GCTTTACCTG CCTTCGGTGC TTTCCAGGGA ACCCCGGCCG
CTGGTGGTCA TGCTGCACGG CTGCAAGCAG ACCGCCACGG ACTTTGCCGC TTCAACCCGC
ATGAACCAGC TGGCCGAGCG CAAGGGTTTC GCGGTGCTGT ATCCGCAGCA GTCGGTGGCC
ACCGATTCGC ACCGCTGCTG GCACTGGTAC CGGCGCGCCA CCCAGCAGGG GCAGGGCGAT
GTCGAACTGA TTGCCGAAAT GGTCAAGCAG GTGCAGGCCA AGCACCGGCT CGACACCTCG
CGCACCTATG TGGCGGGGCT GTCGGCCGGC GCGGGCCTGG CGGCCATCCT GGCCTTGCGC
CATCCCCGGC TGATTGCCGC CGCCGGCCTG CATTCGGCGC CGGTCTATGG GACGAGCGAC
TCCGCGCTGG GCGGCTTCCA GGCGATGCAG CAGGGAGCGG GCATCAAGCA CCCGGAAGCG
GTCCGGGAGT TTACCGACGC GCCGGTGAAG TTTCCCGGCA TGCCGGTGAT GCTGATCCAG
GGCAGGAACG ATCCGGTGGT GCGGCGCGTC AATGTCGATC ACCTGACGGC CCAGTTCGCG
CTGGTCGATG CGCCGTTCAT CACCCGCACC GAGCCGGTCG TGCGCAGCTA TGCCGGGCGC
AGCACCGGCC GCAGTCCGCG CCGCGCCTAC AAGACGGCGA CCTACTACGC GGGCCGAAAG
CCGATGGTGA TGAAGTGCGA AATCGACCTG CTCGGCCATG CCTGGAGCGG CGGCGAGGGC
AGCCTGGACT ACAGCGCGCC CGAAGGCCCG GATGCCACGC TGCTGATGTG GAATTTTTTC
TCGCGCCAGA AGCGCCTGCA ATCGGTGCCT GGCCTCATGT AA
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| Protein sequence | MVRNALKRCK APAVFARPLA FTLFVFSSSQ GTMTKSLTSL WLKNLRRVGK VQQAQGRKLF
KSLLTPVVRA PVAKRAKAAK TIRPITLKNI KAVKAPASKA AKPRRKPAAA PAQPAASVLP
LLPGSWKKSF FTLPGTGLAS ARRMLYWLYL PSVLSREPRP LVVMLHGCKQ TATDFAASTR
MNQLAERKGF AVLYPQQSVA TDSHRCWHWY RRATQQGQGD VELIAEMVKQ VQAKHRLDTS
RTYVAGLSAG AGLAAILALR HPRLIAAAGL HSAPVYGTSD SALGGFQAMQ QGAGIKHPEA
VREFTDAPVK FPGMPVMLIQ GRNDPVVRRV NVDHLTAQFA LVDAPFITRT EPVVRSYAGR
STGRSPRRAY KTATYYAGRK PMVMKCEIDL LGHAWSGGEG SLDYSAPEGP DATLLMWNFF
SRQKRLQSVP GLM
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