| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1934 |
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| Symbol | |
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| ID | 4686405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2053496 |
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| End bp | 2055832 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834943 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_982165 |
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| Protein GI | 121604836 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCC AGGAATTAGA AGTCAGCTTG CACATGGCCT TTGTCGAGGC ACGCCAGCAA
CGCCACGAAT TCATCACCGT GGAACACCTG CTGCTGGCCT TGCTGGACAA CCCCAGTGCC
GCTGAAGTGC TGCGCGCCTG CTCAGCCAAT GTGGATGATT TGCGCAAGTC GCTTGCCAAT
TTCATCAAGG ACAACACCCC CCAGGTAGCC GGCAGCGATG ATGTCGATAC CCAGCCCACG
CTGGGTTTCC AGCGCGTGAT CCAGCGCGCG ATCATGCATG TGCAGTCCAC GGGCAGCGGC
AAGAAGGAAG TAACCGGCGC CAATGTGCTG GTCGCCATTT TTGGCGAAAA AGACTCGCAT
GCGGTGTATT ACCTGCACCA GCAGGGCGTC ACGCGCCTGG ATGTGGTCAA TTTCATTGCC
CACGGCATCA AGAAAAGCGA TCCGCCAGAG CCCACCAAGA CCGGCGAAAC CGCTGCCGAA
AACGAAGAGA GTGGCGAGAA AAATGAAAAA GCCTCGCCGC TGGAGCAGTA CACGGTCAAC
CTGAACCAGC TTGCCAAGGA AGGCAAGATT GATCCGCTGA TCGGTCGCCA CTACGAAGTC
GAGCGCGTCA TCCAGATTCT GTGCCGCAGG CGAAAGAACA ACCCGCTGCT GGTGGGCGAG
GCCGGCGTGG GCAAGACGGC GATTGCCGAG GGCTTGGCTT GGCGCATCAC GCAAAAGGAC
GTGCCGGAAA TTCTGGCCGA AGCCAATGTG TATTCGCTCG ACATGGGTGC CTTGCTCGCC
GGCACCAAGT ATCGGGGCGA CTTCGAGCAG CGGCTCAAGG GCGTGCTCAA GTCGCTGAAG
GACAAGCCCA ACGGCATCCT GTTCATCGAC GAGATTCACA CCCTGATCGG TGCCGGCGCG
GCCTCGGGCG GCACGCTCGA TGCATCCAAC CTGCTCAAGC CGGCCCTCAG TTCGGGCCAG
CTCAAGTGCA TTGGCGCCAC CACCTTCACC GAATACCGTG GCATCTTCGA AAAGGACGCG
GCCCTGTCGC GGCGCTTCCA GAAGGTTGAT GTGGTCGAGC CGACGGTTCA GGAAACCGTC
GATATCCTCA AGGGCCTGAA GTCGCGCTTT GAAGAACACC ATGGCGTCAA GTACGCGCTG
GCTGCGCTGC AGGCTGCGGC CGAACTCAGC GCCAAGTACA TCAATGACCG CCATCTGCCC
GACAAGGCGA TTGACGTGAT TGACGAGGCG GGCGCTGCCC AGCGTATCTT GCCGGCCAAC
AAGCGCAAGA AAACCATCAC CAAGACCGAG GTGGAGGAAA TCGTGGCCAA GATCGCCCGC
ATTCCACCCG CCAATGTGTC GAACGATGAC CGCGGCAAGC TCAAGACGCT GGAACGCGAC
CTCAAAAGCG TGGTGTTCGG CCAGGACAAG GCGCTGGACA TTCTGGCGTC GGCCGTCAAG
ATGGCACGCT CGGGCCTGGG CAAGGACGAC AAGCCGATTG GCTCCTTCCT GTTCTCCGGC
CCCACCGGCG TCGGCAAGAC CGAAGCGGCG AAGCAACTGG CCTACATCAT GGGCATCGAG
CTGATCCGCT TCGACATGTC CGAGTACATG GAGCGCCATG CCGTGAGCCG CCTGATTGGC
GCGCCTCCGG GCTATGTCGG TTTTGACCAG GGCGGGCTGC TGACCGAGGC CGTGACCAAG
AAGCCGCATT GCGTGCTGCT GCTCGACGAA ATCGAAAAGG CGCATCCGGA CATCTTCAAT
GTGCTGCTGC AGGTCATGGA CCACGGCACG CTGACAGACA ACAACGGGCG CAAGGCCGAT
TTCCGCAACG TGATCATCGT CATGACGACC AATGCCGGCG CCGAGACGAT GAACAAGGCG
ACCATCGGTT TCACCAACCC GCGCGAAGCG GGTGACGAAA TGGCCGACAT CAAGCGCCTG
TTCACGCCCG AGTTCCGCAA CCGCCTGGAT GCGGTGGTGA GCTTCAAGGC GCTCGACGAA
GTGGTCATCC TGCGCGTCGT GGACAAGTTC CTGCTGCAGC TTGAAACCCA GCTGGCCGAG
AAGAAGGTCG AGGTGACCTT CACCGACACG CTGCGCAAGT ACCTTGGCAA GAAGGGCTTC
GATCCGCTCA TGGGCGCGCG TCCGATGCAG CGGCTGATCC AGGACACGAT CCGCCGTGCG
CTGGCCGACG AGCTGCTGTT TGGCCGGCTG ACCGAAGGCG GCCGCCTGAC GGTCGACATG
AAGGTCACGA CCGACGAAAA AGGCGTGGAA ACCGGCGAAG TCGAACTCGA CATCCAGCCG
CTGGCCAAAC GCGAAGGCCG TGCCAAGCCG GAGCCGGAAG CGGCCGAGGC GAGTTGA
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| Protein sequence | MIAQELEVSL HMAFVEARQQ RHEFITVEHL LLALLDNPSA AEVLRACSAN VDDLRKSLAN
FIKDNTPQVA GSDDVDTQPT LGFQRVIQRA IMHVQSTGSG KKEVTGANVL VAIFGEKDSH
AVYYLHQQGV TRLDVVNFIA HGIKKSDPPE PTKTGETAAE NEESGEKNEK ASPLEQYTVN
LNQLAKEGKI DPLIGRHYEV ERVIQILCRR RKNNPLLVGE AGVGKTAIAE GLAWRITQKD
VPEILAEANV YSLDMGALLA GTKYRGDFEQ RLKGVLKSLK DKPNGILFID EIHTLIGAGA
ASGGTLDASN LLKPALSSGQ LKCIGATTFT EYRGIFEKDA ALSRRFQKVD VVEPTVQETV
DILKGLKSRF EEHHGVKYAL AALQAAAELS AKYINDRHLP DKAIDVIDEA GAAQRILPAN
KRKKTITKTE VEEIVAKIAR IPPANVSNDD RGKLKTLERD LKSVVFGQDK ALDILASAVK
MARSGLGKDD KPIGSFLFSG PTGVGKTEAA KQLAYIMGIE LIRFDMSEYM ERHAVSRLIG
APPGYVGFDQ GGLLTEAVTK KPHCVLLLDE IEKAHPDIFN VLLQVMDHGT LTDNNGRKAD
FRNVIIVMTT NAGAETMNKA TIGFTNPREA GDEMADIKRL FTPEFRNRLD AVVSFKALDE
VVILRVVDKF LLQLETQLAE KKVEVTFTDT LRKYLGKKGF DPLMGARPMQ RLIQDTIRRA
LADELLFGRL TEGGRLTVDM KVTTDEKGVE TGEVELDIQP LAKREGRAKP EPEAAEAS
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