Gene Pnap_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1933 
SymbolclpS 
ID4686404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2052978 
End bp2053415 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content54% 
IMG OID639834942 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_982164 
Protein GI121604835 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.907528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTG CCCGCCACCA ATTGTCTTAT CCGCTGCAAC GAATGATATC GATGGCTAGA 
ATGATTTCCA TGGCAACAAA ACCCCCTAAA TCTCCGGCGC AACCGCCAAC TCCTGCCGTC
AAGCCTGCCG ACGTGAACGG CGGGGACTCG GTGGTGCTGG AACGCCGCCC GCAAAAGACA
AAACCACCTC AGATGTACCA GGTGGTGCTG CTCAACGATG ACTACACGCC GATGGAGTTT
GTCGTGGTGG TCATCCAGGA ATTTTTCAAC AAGGACCGTG AAACCGCGAC CCAGATCATG
CTCAAGATCC ATCTCGATGG AAAAGGCATT TGCGGAGTAT TCTCCAGAGA TGTCGCGGCA
ACCAAGGTTG ACCAGGTCAC GGAAGCAGCC CGAAAAAATG GCCATCCGCT GCAATGTGTC
AGCGAACCCA TTGAATAA
 
Protein sequence
MSLARHQLSY PLQRMISMAR MISMATKPPK SPAQPPTPAV KPADVNGGDS VVLERRPQKT 
KPPQMYQVVL LNDDYTPMEF VVVVIQEFFN KDRETATQIM LKIHLDGKGI CGVFSRDVAA
TKVDQVTEAA RKNGHPLQCV SEPIE