Gene Pnap_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1932 
Symbol 
ID4686395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2052100 
End bp2052498 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID639834941 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_982163 
Protein GI121604834 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AACTTTACGT CGGCAACCTG CCTTACACAG TGCGTGACGA AGACCTGCAG 
CAGTCTTTTG GTCAATTCGG TGCTGTCACC AGCGCTAAAG TCATGATGGA ACGCGACACC
GGTCGCTCCA AAGGCTTTGG TTTCGTCGAA ATGGGCAGCG ATGCCGAAGC GCAAGCCGCA
ATTGCCGGCA TGAACGGTCA GTCACTTGGC GGCCGTAGCA TCACTGTGAA CGAAGCCCGT
CCAATGGAAG CACGTCCTCC CCGTACCGGC GGCTTCGGTG GCGGTGGTGG TTATGGCGGT
GGTGGCGATC GTTCTGGTGG CGGTGGCTAC GGCGGCGGCG ATCGTTCTGG CGGTGGCGGT
GGCGGTTACG GCGGCGGCGG TGGTCGCGGC GGCTACTAA
 
Protein sequence
MGNKLYVGNL PYTVRDEDLQ QSFGQFGAVT SAKVMMERDT GRSKGFGFVE MGSDAEAQAA 
IAGMNGQSLG GRSITVNEAR PMEARPPRTG GFGGGGGYGG GGDRSGGGGY GGGDRSGGGG
GGYGGGGGRG GY