Gene Pnap_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1925 
Symbol 
ID4686284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2046104 
End bp2046727 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content61% 
IMG OID639834934 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_982156 
Protein GI121604827 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.373423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTCGA TCATACAAGC CGCAGGCTGG CCGATCTGGC CCCTGCTAGC GTGTTCCATA 
GTGGCCCTGG CACTGATCAT TGAGCGTTTT TCAAGCCTGA AAACACTGAA AGTTGCACCG
CCCAAATTAC TTGGCGAAGC GATGATTGTC TCGCGAGCCA CCCTTCCATC GCCCGATGTC
GTCCTGAAAC TGGAACAGAA CTCCCTCCTT GGCGAAGTGC TGGCCAGCGG CTTTCGGGCG
CTTGGCGCCA ATCCGCGCAT CAGCGAAGCC GACCTGCGCT CCACACTGGA AGGCGCCGGT
CGCCAGGCGG CACACAAACT GGAACGCTAC CTGGCCGCGC TGGCGACGAT TGCCTCGGCG
GCGCCCCTGC TCGGCCTGCT GGGCACGGTA ATCGGCATGA TCGAGATTTT CGGCGCCCAG
ACGGGCAGTG CGGGCGGCGC CAACCCGGCG CAACTGGCGC AAGGCATTTC AATGGCGCTG
TACAACACCG CTTTCGGCCT GATGGTGGCC ATACCGGCAC TGATTTTCTG GCGCTACTTT
CGCGCCCGGG TGGATGGCTA CCTGCTGACG ATGGAACTGG CGGCCGAACA GTTTGTGCGC
CATCTCAATC GGCTGCGCAA ATGA
 
Protein sequence
MFSIIQAAGW PIWPLLACSI VALALIIERF SSLKTLKVAP PKLLGEAMIV SRATLPSPDV 
VLKLEQNSLL GEVLASGFRA LGANPRISEA DLRSTLEGAG RQAAHKLERY LAALATIASA
APLLGLLGTV IGMIEIFGAQ TGSAGGANPA QLAQGISMAL YNTAFGLMVA IPALIFWRYF
RARVDGYLLT MELAAEQFVR HLNRLRK