Gene Pnap_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1922 
Symbol 
ID4686992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2044436 
End bp2044618 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content60% 
IMG OID639834931 
Producthypothetical protein 
Protein accessionYP_982153 
Protein GI121604824 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.504408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA AACTACTTGA ACTGCTGGTC TGCCCCGTGA CCAAGGGCCA TCTCGAATAC 
GACCGCGAGA AGCACGAACT CATCTCGCGC AGCGCCCGGC TGGCCTATCC GGTGCGTGAC
GGCATTCCTG TCATGCTGGA AAACGAAGCC CGTACCCTGA CCGACGAAGA GCTTGGCCTG
TGA
 
Protein sequence
MDTKLLELLV CPVTKGHLEY DREKHELISR SARLAYPVRD GIPVMLENEA RTLTDEELGL