Gene Pnap_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1918 
Symbol 
ID4686755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2040992 
End bp2041696 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content60% 
IMG OID639834927 
ProductLexA repressor 
Protein accessionYP_982149 
Protein GI121604820 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.726734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTT TTAATGATTT TTCGGGTTTG CCCGCTGACC GGCCCAAGCT GACTGCGCGG 
CAGGCGCAGA TTCTGGAACT GATCCGCAAT GCCATTGCCC AGACAGGCGC GCCGCCCACC
CGCGCGGAAA TAGCGGCAGA ACTGGGTTTT CGCTCGCCCA ATGCCGCCGA AGAACATTTG
AAAGCACTGG CCAAGAAGGG CGTCATTGAA CTGGTCAGCG GCACCTCGCG CGGCATTCGG
CTGCGCACGG ACTCCTTGCA GGCCCTGAAC GAGTCGCGCA TCAGCCAGTT TTCGCCGCCC
GTTCAGCGGC TGGAGCAACT GACCTTGCCT CTGGTCGGGC GTGTTGCCGC CGGAAGTCCG
ATTCTTGCGC AGGAACATAT CGAGCGCACC TACTTTTTCG AGAGCCGTCT GTTTGAGCAA
CAGCCCGACT ACCTGCTGAA GGTGCGCGGC ATGAGCATGC GGGACATCGG CATCATGGAC
GGCGACCTGC TGGCCGTCAA GCAAGCCAGG GAAGCCAAGA ATGGCCAGAT CGTGGTGGCG
CGCCTGGGCG ATGAGGTCAC CGTCAAACGC TTTCACCGCA ACCAGCACCT GATCGAATTG
CTGTCTGAAA ATCCCGACTT CAAACCCATC GTGGTTCAGC CTGGCGAGCC TTTCGAGCTT
GAAGGCCTGG CCGTCGGATT AATCCGCGGC AGCCTGGCGA TGTAA
 
Protein sequence
MRTFNDFSGL PADRPKLTAR QAQILELIRN AIAQTGAPPT RAEIAAELGF RSPNAAEEHL 
KALAKKGVIE LVSGTSRGIR LRTDSLQALN ESRISQFSPP VQRLEQLTLP LVGRVAAGSP
ILAQEHIERT YFFESRLFEQ QPDYLLKVRG MSMRDIGIMD GDLLAVKQAR EAKNGQIVVA
RLGDEVTVKR FHRNQHLIEL LSENPDFKPI VVQPGEPFEL EGLAVGLIRG SLAM