Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1918 |
Symbol | |
ID | 4686755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2040992 |
End bp | 2041696 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639834927 |
Product | LexA repressor |
Protein accession | YP_982149 |
Protein GI | 121604820 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.726734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTT TTAATGATTT TTCGGGTTTG CCCGCTGACC GGCCCAAGCT GACTGCGCGG CAGGCGCAGA TTCTGGAACT GATCCGCAAT GCCATTGCCC AGACAGGCGC GCCGCCCACC CGCGCGGAAA TAGCGGCAGA ACTGGGTTTT CGCTCGCCCA ATGCCGCCGA AGAACATTTG AAAGCACTGG CCAAGAAGGG CGTCATTGAA CTGGTCAGCG GCACCTCGCG CGGCATTCGG CTGCGCACGG ACTCCTTGCA GGCCCTGAAC GAGTCGCGCA TCAGCCAGTT TTCGCCGCCC GTTCAGCGGC TGGAGCAACT GACCTTGCCT CTGGTCGGGC GTGTTGCCGC CGGAAGTCCG ATTCTTGCGC AGGAACATAT CGAGCGCACC TACTTTTTCG AGAGCCGTCT GTTTGAGCAA CAGCCCGACT ACCTGCTGAA GGTGCGCGGC ATGAGCATGC GGGACATCGG CATCATGGAC GGCGACCTGC TGGCCGTCAA GCAAGCCAGG GAAGCCAAGA ATGGCCAGAT CGTGGTGGCG CGCCTGGGCG ATGAGGTCAC CGTCAAACGC TTTCACCGCA ACCAGCACCT GATCGAATTG CTGTCTGAAA ATCCCGACTT CAAACCCATC GTGGTTCAGC CTGGCGAGCC TTTCGAGCTT GAAGGCCTGG CCGTCGGATT AATCCGCGGC AGCCTGGCGA TGTAA
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Protein sequence | MRTFNDFSGL PADRPKLTAR QAQILELIRN AIAQTGAPPT RAEIAAELGF RSPNAAEEHL KALAKKGVIE LVSGTSRGIR LRTDSLQALN ESRISQFSPP VQRLEQLTLP LVGRVAAGSP ILAQEHIERT YFFESRLFEQ QPDYLLKVRG MSMRDIGIMD GDLLAVKQAR EAKNGQIVVA RLGDEVTVKR FHRNQHLIEL LSENPDFKPI VVQPGEPFEL EGLAVGLIRG SLAM
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