| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1916 |
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| Symbol | |
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| ID | 4686922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2039336 |
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| End bp | 2040343 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639834925 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_982147 |
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| Protein GI | 121604818 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTG TGATTCTCGA TGACTACCAG GATGCCGTGC GCAAACTGGC ATGCGCCGCC
AGGCTGGAAG CCTATCCAGC CAAGGTCTAT ACCAACACCG TCAAGGGCGC AGGCCAGTTG
TCGGTCCGGC TTAAAGACGC CGACGTGATC GTGCTGATCC GCGAACGCAC CCACCTGACA
CGCCAGCTGA TTGAAAAGCT GCCCCGGCTC AAGCTGGTGG TCCAGACGGG CCGCATCGGC
AGTCACGTGG ACGTGGCAGC CTGCACCGAA CGCGGGATTG CCGTGGCCGA AGGCACCGGT
TCGCCCGTCG CACCGGCCGA ACTGACCTGG GCACTCGTCA TGGCCGCCAT GCGCCGGATT
CCCCAGTATG TGTCGCACCT AAAACATGGT GCATGGCAGC AGTCAGGGCT GAAATCGGCC
TCCATGCCGC CGAATTTCGG CCTCGGAACG GTCCTCAAGG GCAAGACGCT GGGAATCTGG
AGCTACGGCA AGACCGGGCA ACTCGTGGCC GGCTATGGCC GGGCATTTGG CATGCGGGTG
ATCATCTGGG GCAGCCCGGC ATCACGCGAA CGCGCCCAGG CCGACGGGTT TGAGCTGGCG
CCCAGCAAAA CCGAGCTGTT CAAGCAATGC GACGTGCTCA GCCTGCACCT GCGGCTGAGC
GAAGAAACCA CAGGCATCGT GACGCTGGAA GACATGTCGC GCATGAAACC CACCGCCCTG
CTGGTCAATA CCTCGCGCGC CGAGCTGATT GAATCCGAAG CGCTGCTTGC CGCGCTCAAC
CGGGGGCGTC CGGGCATGGC GGCCATCGAC GTTTTTGAAT CCGAACCGAT CCTGCAGGGC
CACGCCCTGC TGCGGCTGGA AAACTGCATC TGCACGCCGC ACATCGGCTA TGTCGAGCAG
GACAGCTACG AGATGTATTT TGGCGCTGCC TTTGACAACG TGATCAACTT CATCAAGGGC
ACGCCGACCA ACATCGTCAA TCCGGGCGCG CTGCAGGTCA GGCGCTAG
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| Protein sequence | MNIVILDDYQ DAVRKLACAA RLEAYPAKVY TNTVKGAGQL SVRLKDADVI VLIRERTHLT
RQLIEKLPRL KLVVQTGRIG SHVDVAACTE RGIAVAEGTG SPVAPAELTW ALVMAAMRRI
PQYVSHLKHG AWQQSGLKSA SMPPNFGLGT VLKGKTLGIW SYGKTGQLVA GYGRAFGMRV
IIWGSPASRE RAQADGFELA PSKTELFKQC DVLSLHLRLS EETTGIVTLE DMSRMKPTAL
LVNTSRAELI ESEALLAALN RGRPGMAAID VFESEPILQG HALLRLENCI CTPHIGYVEQ
DSYEMYFGAA FDNVINFIKG TPTNIVNPGA LQVRR
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