| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1915 |
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| Symbol | |
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| ID | 4687060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2037758 |
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| End bp | 2039320 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834924 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_982146 |
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| Protein GI | 121604817 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCC ATCCATCAAC CATCGGCCTT CACCCAACAA TGCACACAAC AATTTTTAAA
ACGGTCGGCA TTGTCGGCAC CGGGGCCATG GGGCGCGGCA TCGCCCAGAT CGCGGCCCAG
GCCGGCAGCA TCGTCAAGCT GATGGATGCC CAGGCGGGCG CCGCTGAAAA AGCCCATCAA
GCCCTCTTCA GCCAGTGGGA CAAGCTGGTC GAAAAAGAGC GGATTTCCCC TGACGCAGCC
CACGCGCACA AGGCCAGGCT GCGGGTGGCC GGCACGCTGG CTGACCTGTC GGACTGCGAC
CTGGTGATTG AAGCCATCGT CGAGCGGCTG GACATCAAGA AAGCGCTGTT CGCCCAGCTT
GAAGCCATCG TGCCGGCGCA AGCCGTGCTG GCAAGCAATA CGTCTTCGCT GTCGGTGACC
GCGATTGCCG CAGCCCTCAA GCACCCCGAA CGCTTTGCCG GCTATCACTT CTTCAACCCG
GTTCCGCTGA TGAAAGTCGT CGAAATCATC GCCGGGCTGA AAACCGGCGC CGACACTTGC
CACGGTTTGA GCCAGTACGC CCGCCAGATG GGCCACACGC CGGTGCAGGC GCAGGACACG
CCGGGCTTCA TCGTCAACCA CGCCGGGCGC GGCTACGGCA CCGAGGCGCT GCGCATCGTC
AGCGAAGGCA TTGCCGACTT CGCCACCATC GACCGCATCC TGCGCGACCA GGCCGGCTTC
AAGCTCGGAC CGTTCGAGTT GATGGACCTG ACCGGACTCG ATGTTTCGCA TCCGGTGATG
GAATCGATTT ACCACCAGTA TTACGAGGAA GACCGCTACC GCCCCAGCGT CATCACCGCG
CAGCGCCTGG CCGGCGGACT GCTGGGCCGC AAGACCGGCG AAGGCTTTTA CCGCCATGAA
GGCGGCGTGG CACAGGTTCC GGCCGAAGCG CCGCCTCCCG TTGTGGCCGA AATGCCGCCG
GTCTGGGTGT CGCCTAGAGC GGCCCGGCGT TCGGAATTGC TGCAATTACT CAAGAACCTG
GGCGCCCACA TCGAAACCGG CCAGTCGCCG TCCCCGCAGG CGCTGACGCT GGTCGCGCCG
CTGGGCTTTG ACATCACGAC GGTGGCCGTG GTCGAGCGGC TGGACCCGGC GCGCACCGTC
GGCATCGACA TGCTGATCGA TGACGCCACC ACCAAACGCC GCGTCCTGGC GACCAACCCG
GCCACGCGCA GCGACATGCG CGATGCGGCG CATGCGCTGT TTGCCCGCGA CGGCAAGGCG
GTCAGCGTGA TCCGCGACAG CGGCGGCTTT GTCACGCAGC GCGTCGTCGC CACCATCGTC
AACATTGCCA GCGACATCTG CCAGCAGGGC GTCTGCAGCC CCAAAGACCT GGAAACCGCC
GTCACGCTGG GCCTTGGCTA TCCGATGGGA CCGCTGGCCA TGGGCGACCG TTATGGTCCG
ACCAATGTGC TCGAAGTGCT GTTCAACATG CAAACCGTGT ATGGCGACCA GCGCTACCGC
CCTTCACCGT GGCTGCGCCG CCGGGGCGCG ATTGGCCTGA GCCTGATGCA CGAGGAAAGC
TGA
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| Protein sequence | MPSHPSTIGL HPTMHTTIFK TVGIVGTGAM GRGIAQIAAQ AGSIVKLMDA QAGAAEKAHQ
ALFSQWDKLV EKERISPDAA HAHKARLRVA GTLADLSDCD LVIEAIVERL DIKKALFAQL
EAIVPAQAVL ASNTSSLSVT AIAAALKHPE RFAGYHFFNP VPLMKVVEII AGLKTGADTC
HGLSQYARQM GHTPVQAQDT PGFIVNHAGR GYGTEALRIV SEGIADFATI DRILRDQAGF
KLGPFELMDL TGLDVSHPVM ESIYHQYYEE DRYRPSVITA QRLAGGLLGR KTGEGFYRHE
GGVAQVPAEA PPPVVAEMPP VWVSPRAARR SELLQLLKNL GAHIETGQSP SPQALTLVAP
LGFDITTVAV VERLDPARTV GIDMLIDDAT TKRRVLATNP ATRSDMRDAA HALFARDGKA
VSVIRDSGGF VTQRVVATIV NIASDICQQG VCSPKDLETA VTLGLGYPMG PLAMGDRYGP
TNVLEVLFNM QTVYGDQRYR PSPWLRRRGA IGLSLMHEES
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