Gene Pnap_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1910 
Symbol 
ID4688254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2032809 
End bp2033342 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID639834919 
Producttransposase and inactivated derivative 
Protein accessionYP_982141 
Protein GI121604812 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.548528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.976788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCCC AGCAAATCAT TGATCAGCTG CAGCCCTATG ATTTCGACCG GCTGGCTCGC 
AAGGAACCCG ATGGGCGCCG GCGACTGCGC CTGATAGCAC TGGCGCACCT CAAAGAAGGC
AAAAGCTGCA GCGAAGTGGG CGCGGCACTG CGCGTGAGCC GCCACGCGGT CATGCGCTGG
GTACAGTGGT TTACCGCTGG CGGCGTGGCC CGTCTGGCCG GCATGCCGCA CGACTGGAGC
ACGCAGCGCC TTGCCAAAGC ACAGGAAGAA GCCTTTCGCC AGGCCGTCGA ACAACTCCAG
TGCGAACGCG GCGGTGGGCG GGTTCGGGGT GAAGATATTC GCCAGTTGTT GGACCGGCAG
TTTGGCGTTG CCTACAGCTT GAACGGTGTG TATGACCTCA TGAAGCGCTT GGGCATGGTA
TGGATTTCGG CGCGCGCCGT CAGTCCCAGT GCCGATCCGG TGGCACAAGC CGAATTCAAA
AAAAAACTTC GTCCAGGAAG TCGCGGCAAC GCTGCCCCCG AGCATTGCGC CTGA
 
Protein sequence
MLSQQIIDQL QPYDFDRLAR KEPDGRRRLR LIALAHLKEG KSCSEVGAAL RVSRHAVMRW 
VQWFTAGGVA RLAGMPHDWS TQRLAKAQEE AFRQAVEQLQ CERGGGRVRG EDIRQLLDRQ
FGVAYSLNGV YDLMKRLGMV WISARAVSPS ADPVAQAEFK KKLRPGSRGN AAPEHCA