Gene Pnap_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1909 
Symbol 
ID4687558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2032271 
End bp2032780 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID639834918 
ProductISSod10, transposase OrfB 
Protein accessionYP_982140 
Protein GI121604811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.753374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG GCCAGCGCGG CACGCAAACG CGCCTGTGGG CGCGCAAGGG AACGCGCCCC 
CGGGTGGTGC GCCAGCAGCA GTCCGAATCG GCATACATCT TTGGCGCAGT CTGTCCACAG
CAGGGTAGCG CGGTCGGTCT GGTCATGCCG CACGCCAATA CCGAGGCAAT GGCCCATCAC
CTGCAGGCCC TGAGCGAGGC GGTGCCTGCG GGGCGCCACG CGGTGCTGGT GCTCGATCGT
GCAGGGTGGC ATACCACCGC CAAACTGCCC CAGTTCTCCA ACCTCTCATT GCTGCCGCTG
CCCGCGGGTT CACCCGAACT CAACCCGGCC GAGCAGGTGT GGCAGCAACT GCGCGACCGG
CACCTGGCAA ACCGTTGCTA CGACAGCTAC GAGCAGATCG TCGACGCCTG CTGCGACGCC
TGGAATGCCT TCACGCAGAT TCCTGGTGCC ATCCGCTCTT TGTGCTCCCG CCGCTGGGCC
ATGGTGCCTT CGGCATCGGT AATGTCATGA
 
Protein sequence
MRIGQRGTQT RLWARKGTRP RVVRQQQSES AYIFGAVCPQ QGSAVGLVMP HANTEAMAHH 
LQALSEAVPA GRHAVLVLDR AGWHTTAKLP QFSNLSLLPL PAGSPELNPA EQVWQQLRDR
HLANRCYDSY EQIVDACCDA WNAFTQIPGA IRSLCSRRWA MVPSASVMS