Gene Pnap_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1896 
Symbol 
ID4689717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2017502 
End bp2017972 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID639834903 
ProductCHRD domain-containing protein 
Protein accessionYP_982127 
Protein GI121604798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.944907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC GCCGCCAAGC CACCCGCCTT TGCCTTGCCG CCCTTGCCGT GGCAGCTGCC 
GCCGCCATCA CCGGCTGCGG CATGATGCCG GGCAAGCCAT CGTCTTCCAA TCTGATCGCC
CTGAGCACCC AGTTGCGCGG CGCCAACGAA GTGCCGCCCA ATGCCAGCCA GGGCAGCGGC
TCGGTCGATG CGGTGCTGAA CAAGGACACC AATTTGCTGC GCTGGAAGGT CAACTTCACC
GGCCTGAGCG GCCCGGCCAC GGCGGCGCAC TTCCATGGCC CGGCTGCCGC CGGCGCCAAT
GCCGGCGTTG TCCTGCCCTG GCCGGGTCCG GTCACCAGCC CGATGGAAGG CAGCGCCACG
CTGACCGCCG CCCAGGCGGC CGACCTGGTG GCTGGCCGCT GGTACGCCAA CATCCACACC
GCAGCCAGCC CGGGCGGGGA AATTCGCGGC CAGATGACGG TGCGCAACTG A
 
Protein sequence
MTTRRQATRL CLAALAVAAA AAITGCGMMP GKPSSSNLIA LSTQLRGANE VPPNASQGSG 
SVDAVLNKDT NLLRWKVNFT GLSGPATAAH FHGPAAAGAN AGVVLPWPGP VTSPMEGSAT
LTAAQAADLV AGRWYANIHT AASPGGEIRG QMTVRN