| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1890 |
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| Symbol | |
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| ID | 4688655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2013429 |
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| End bp | 2014190 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834897 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_982121 |
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| Protein GI | 121604792 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.575059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT CCCCCAAAGT TCTTTTCGGT TTTCATGCCG TCGGTGTTCG CCTCAAAACC
GCGCCAAAGT CGGTTCTTGA AGTTTTTTAC GATGTCTCGC GCCGCGATGC CCGCATGCGC
CAGTTCACCG ACCGTGTCCG CGAAGCCGGC GTTCGCATGG TCGAGTGCGA CGGCCTGCGC
CTGGCCAAGA TGTGCGGCAG CCACGGCCAC CAGGGCGTCG TCGCCCGCGT CGATGCCGTG
GCCCAGGTCA CGTCGCTCGA TGAGTTGCTG GAGCAGCTCG AAGAAGCCGG CACCGCGCAG
CCCTTGCTGC TGGTGCTCGA CGGCGTGACC GATCCGCACA ACCTGGGCGC CTGCCTGCGG
GTGGCCGACG GCGCCGGCGC GCAAGCCGTG ATCGCGCCCA AGGACCATGC CGCCGGCATC
AATGCCACGG TCGCCAAGGT CGCCAGCGGC GCCGCCGAGA CCGTGCCGTA TTTCATGGTG
ACCAACCTGG CGCGCACGCT CAATGAATTG AAAGAGCGCA ACATCTGGTG CATCGGCACC
AGCGACGACG CCGAAAAGAC GATTTACGAC GTGGACCTGA CCGGCCCGGT GGCCTTGATT
CTGGGCGCCG AGGGCGAGGG CATGCGCCAG CTCACGCGCA AGACCTGCGA CGAGCTGGTC
AGCATTCCGA TGCAGGGCGC GGTCGAAAGC CTGAACGTGT CGGTCGCCAG CGGCGTGTGC
CTGTATGAAG CGCTGCGCCA GCGCCGCCCG GCAGCCGCCT GA
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| Protein sequence | MSSSPKVLFG FHAVGVRLKT APKSVLEVFY DVSRRDARMR QFTDRVREAG VRMVECDGLR
LAKMCGSHGH QGVVARVDAV AQVTSLDELL EQLEEAGTAQ PLLLVLDGVT DPHNLGACLR
VADGAGAQAV IAPKDHAAGI NATVAKVASG AAETVPYFMV TNLARTLNEL KERNIWCIGT
SDDAEKTIYD VDLTGPVALI LGAEGEGMRQ LTRKTCDELV SIPMQGAVES LNVSVASGVC
LYEALRQRRP AAA
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