Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1889 |
Symbol | |
ID | 4688768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2012582 |
End bp | 2013298 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834896 |
Product | ABC transporter related |
Protein accession | YP_982120 |
Protein GI | 121604791 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.236618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.569597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGAAG TTTCTTCCAG GCTGTCTGGG TCATTGGAGC CTGCCAGTTC TCCAATTGTT TGCGTTGAGC ATGTTTTCAA GTCGGTCACC GACTCGACCG GCACCTTGAG CATTTTGCGC GACATTGACT TTGCGCTGAA TGCGCGTGAA ACCGCCGCCA TTGTCGGCGC ATCGGGCTCG GGCAAAAGCA CGCTGCTGAC CATCATCGCC GGGCTGGACA CGCCCACGAA GGGCACGGTG CGGCTGGCGG GCCAGGATAT CTTTGCGCTC AGCGAGGACG ACCGCGCGGC CCTGCGGGCG CAAAAAGTCG GTTTCGTGTT CCAGAGCTTT CAGCTCATGG CCAATTTGAC GGCGCTGGAA AATGTCATGC TGCCGCTCGA ACTCTCTGGC GTCAAACAGG CCAGGGCGCT GGCGAGCGAC ATGCTCAAGC GGGTCGGCTT GAGCGAGCGG CTCGGCCACT ACCCGAAGGT GCTGTCGGGC GGTGAGCAGC AGCGCGTGGC GCTGGCGCGC GCCTTTGTCG TCAAGCCGGC GGTGCTGCTG GCCGACGAGC CGACCGGCAG CCTGGACTTT GCCACCGGCG AGACGGTGAT GAAGCTGATG TTCGAGCTGA ACCAGGAACT CGGCACGACC TTGGTGCTGG TCACGCACGA CCCGGCCATT GCGGCGCGCT GCCAGCGGCG CATCACCATC GAAGCCGGGC AGGTCGTGGT TTCATGA
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Protein sequence | MGEVSSRLSG SLEPASSPIV CVEHVFKSVT DSTGTLSILR DIDFALNARE TAAIVGASGS GKSTLLTIIA GLDTPTKGTV RLAGQDIFAL SEDDRAALRA QKVGFVFQSF QLMANLTALE NVMLPLELSG VKQARALASD MLKRVGLSER LGHYPKVLSG GEQQRVALAR AFVVKPAVLL ADEPTGSLDF ATGETVMKLM FELNQELGTT LVLVTHDPAI AARCQRRITI EAGQVVVS
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