| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1880 |
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| Symbol | |
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| ID | 4686170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2004608 |
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| End bp | 2005507 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639834887 |
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| Product | HflC protein |
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| Protein accession | YP_982111 |
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| Protein GI | 121604782 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.476846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAGAG TCGGACTTGT CGTTTCTTCG TTGCTGGTGC TGCTGGCGCT GCTCAGTTCC
ACGCTGTTTG TTGTTGATCA GCGCCAGTTT GGCGTGGTGT ACGCACTGGG CCAGATCAAG
GAAGTGGTTC TGGAGCCCGG CCTTAATTTC AAGCTGCCCC CGCCTTTCCA GAATGTTTCC
TATATTGACC GGCGGCTGCT GACACTTGAA AGCACCGACT CGGAACCCAT GCTGACCGCT
GAAAAGCAGC GTGTCGTGAT TGACTGGTAT GTGCGCTGGC GCATCATCAA TCCTTCGGAG
TACATCCGTA ACGTCGGCCT TGACGAGAAG GCGGGCGCCA ACCAGCTCAA TCGCGTGGTC
CGCAACGCTT TTCAGGAAGA AATCAACCGG CGCACCGTCA AGGACCTGCT GTCGCTCAAA
CGCGAGCAGT TGATGGCTGA TGTGAAAAAG GAAGTGCTTG CGGTGGTCCG TGGCAGCAGT
CCGTGGGGTG TCGATGTGAT TGATGTACGA ATCACCCGCG TTGATTATGT GGAAGCCATC
ACTGAATCGG TTTATCGCCG CATGGAGGCC GAGCGCAAGC GGGTGGCCAA CGAACTGCGT
TCCACGGGTG CTGCCGAAGG CGAAAAAATC CGCGCCGATG CAGACCGCCA GCGCGAGATT
ACCGTGGCCA ATGCTTATCG GGACGCACAG AAAATCAAGG GCGAGGGCGA TGCCGAGGCG
GCGCGGACTT TTGCCCAATC GTTTGGCCAG GATCCGCAGT TCGCCCAGTT CTACCGCAGC
CTGGACGCCT ACAAGGCCAG CTTCAGCAAG AAGAGCGATG TGATGGTGAT GGATCCTTCC
TCGGATTTCT TCAAGGCCAT GCGCGGGTCT GGCAGCGCTG GCAGTGCGGC TTCACGTTAA
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| Protein sequence | MNRVGLVVSS LLVLLALLSS TLFVVDQRQF GVVYALGQIK EVVLEPGLNF KLPPPFQNVS
YIDRRLLTLE STDSEPMLTA EKQRVVIDWY VRWRIINPSE YIRNVGLDEK AGANQLNRVV
RNAFQEEINR RTVKDLLSLK REQLMADVKK EVLAVVRGSS PWGVDVIDVR ITRVDYVEAI
TESVYRRMEA ERKRVANELR STGAAEGEKI RADADRQREI TVANAYRDAQ KIKGEGDAEA
ARTFAQSFGQ DPQFAQFYRS LDAYKASFSK KSDVMVMDPS SDFFKAMRGS GSAGSAASR
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