Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1879 |
Symbol | |
ID | 4686515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2003180 |
End bp | 2004595 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639834886 |
Product | HflK protein |
Protein accession | YP_982110 |
Protein GI | 121604781 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.239775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTGA ATCCCGTGCT GCAGACGCTG ACGAACTTTC CGGGTCGGCT CAAACAACGC GCCCAAGGCA TATTCAATCT CAATGATCCG CGCTGGGGCC GGGATGAAGA TAAATCATCG TCTGACGGCA GCAAGCCTGA CGGACCCCGC GAAGACCGGC AGCCTCCCAA ACCCGGTAAT CGCCCACAGG GTCAGGGGCC GAATCAGGGG CCTCCAGATC TGGATGAACT CTGGCGCGAT TTCAACCGAA AATTGGGCGG CTTGTTTGGC GGCGCCAAAA ATGGCGGCAA CCGGGGTGGC CTTGGCGGTG GCAACAAGGG CAATGGCAGC AATGGCGGGG GATTTCAGCC TGACATGAAA AACGCAGGTA TTGGCGTTGG CCTGATCGCC GCCGTGGTGG CGCTGATCTG GCTGGGAACC GGGTTTTTCA TCGTCCAGGA AGGTCAGCAA GCGGTGATCA CCCAGTTCGG CAAATACCAG TCAACGGTGG GTGCCGGTTT TAACTGGCGT TTGCCATATC CGATACAGCG TCACGAAATC GTGGTGGTGA CCCAGATCCG GTCGGTCGAT GTAGGCCGTG ACACCATCCT GAAGGCAACC GGTCTGCGGG ACTCGGCCAT GCTGACTGAA GACGAGAATA TTGTCGAGAT CAAGTTTGCC GTGCAATACC GCCTGAACAA TGCACGCGCC TATCTGTTCG AGAGCAAGGA TCCTTCCGCC GCAGTGGTTC AGGCGGCTGA AACCGCGGTG CGTGAAGTGG TTGGCAAAAT GAAAATGGAC ATGGCTCTTG CCGAGGAGCG CGACCAGATC GGCCCGCGCG TTCGGGTGCT CATGCAGACC ATCCTGGACC GCTACAAGGT GGGTGTCGAA GTGGTCGCCA TCAATCTGCA GCAAAGTGGT GTGCGCCCGC CCGAGCAGGT GCAGGCCGCA TTTGATGATG TGCTCAAGGC CGGACAGGAA CGCGAGCGTG CCAAGAACGA AGCCCAGGCC TATGCCAATG ACGTCGTGCC CCGCGCCGTC GGTTCCGCAT CGCGGCTGAA GGAAGAGGCC GATGCCTACA AGGCTCGTAT CGTGGCGCAG GCACAGGGTG ATGCGCAGCG TTTCAGCTCG GTCCTGGCCG AATACCAGAA AGCACCGCAG GTAACCCGTG ATCGCATGTA CACGGACGCC ATGCAGCAGG TCTATACCAA TGTCACCAAG GTGCTGGTTG AGTCCCGCCA GGGGTCCAAC CTGTTGTACC TGCCCCTTGA CAAAATCATG CAGATGTCCG GGCAGGCTGG TGCATCGGCA GCCTCCGATC CGTTGCTTGC GCCCGGTGGG GCCACATCTC CCGCAGCGCA GCCGCCCGCC AATGGCCTGC CTGTCGATTC CCGTGCGCGC GATACCTCCC GCACCCGCGA ACGTGAAACC CGCTAA
|
Protein sequence | MNLNPVLQTL TNFPGRLKQR AQGIFNLNDP RWGRDEDKSS SDGSKPDGPR EDRQPPKPGN RPQGQGPNQG PPDLDELWRD FNRKLGGLFG GAKNGGNRGG LGGGNKGNGS NGGGFQPDMK NAGIGVGLIA AVVALIWLGT GFFIVQEGQQ AVITQFGKYQ STVGAGFNWR LPYPIQRHEI VVVTQIRSVD VGRDTILKAT GLRDSAMLTE DENIVEIKFA VQYRLNNARA YLFESKDPSA AVVQAAETAV REVVGKMKMD MALAEERDQI GPRVRVLMQT ILDRYKVGVE VVAINLQQSG VRPPEQVQAA FDDVLKAGQE RERAKNEAQA YANDVVPRAV GSASRLKEEA DAYKARIVAQ AQGDAQRFSS VLAEYQKAPQ VTRDRMYTDA MQQVYTNVTK VLVESRQGSN LLYLPLDKIM QMSGQAGASA ASDPLLAPGG ATSPAAQPPA NGLPVDSRAR DTSRTRERET R
|
| |