Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1874 |
Symbol | |
ID | 4689114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1998413 |
End bp | 1999105 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639834881 |
Product | hypothetical protein |
Protein accession | YP_982105 |
Protein GI | 121604776 |
COG category | [S] Function unknown |
COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.426873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC ACCTCGATTT GGAAGAACAG GAACAGCTTG ACGAACTCAA GCATTTCTGG AAGCAGTATG GCAACCTGAT TACCTGGGCT TTGATTGTCG TTTTGGGGGC CTTTGCCGCC TGGAACGGCT ACCAGTACTG GCAGCGCAGT CAGGCGGCCC AGGCGTCGGT GATGTTTGAC GAGATCGAGC GCGCCGTGCA GTCGGGTGAA ACTGCAAGAA TTGACCGTGC GCTGGCTGAC ATGAAAGAGC GTTTCGGCAG TACCGCTTAC GCCCAGCAAG CCGGACTTCT GGCCGCCAAG GCTCACTACG ACAAAGGCAA TGTCGATGCC GCCCGTGCCG CCCTGACGTG GGTTGCCGAC AAAGCAGCCG ATCCGGGCTA CCAGGCGGTG GCCAAACTGC GCCTTGCCGG AATCCTGCTT GAAAAGAAAG CGTATGACGA AGCGCTGCAG CAGGTGTCGG GCGCCTTTCC GAAAGATTTT TCAGGCCTGG TTGCTGACCG GCGCGGTGAC ATCCTGATGG CGCAAGGCAA GAAAACCGAA GCCAAGGCCG AGTACGAAAA AGCCTACAAG GCGCTTGACG AGCGTGCCGA ATACCGGCGC CTGGTCGAGG TCAAGCTCAA TGCGCTGGGT GTTGATCCCG CTGCCGGGCA GGTCAAGCTT GCAACTGCCG AAAATGCCGG AGCGAATAAA TGA
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Protein sequence | MAQHLDLEEQ EQLDELKHFW KQYGNLITWA LIVVLGAFAA WNGYQYWQRS QAAQASVMFD EIERAVQSGE TARIDRALAD MKERFGSTAY AQQAGLLAAK AHYDKGNVDA ARAALTWVAD KAADPGYQAV AKLRLAGILL EKKAYDEALQ QVSGAFPKDF SGLVADRRGD ILMAQGKKTE AKAEYEKAYK ALDERAEYRR LVEVKLNALG VDPAAGQVKL ATAENAGANK
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