Gene Pnap_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1874 
Symbol 
ID4689114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1998413 
End bp1999105 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content58% 
IMG OID639834881 
Producthypothetical protein 
Protein accessionYP_982105 
Protein GI121604776 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.426873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC ACCTCGATTT GGAAGAACAG GAACAGCTTG ACGAACTCAA GCATTTCTGG 
AAGCAGTATG GCAACCTGAT TACCTGGGCT TTGATTGTCG TTTTGGGGGC CTTTGCCGCC
TGGAACGGCT ACCAGTACTG GCAGCGCAGT CAGGCGGCCC AGGCGTCGGT GATGTTTGAC
GAGATCGAGC GCGCCGTGCA GTCGGGTGAA ACTGCAAGAA TTGACCGTGC GCTGGCTGAC
ATGAAAGAGC GTTTCGGCAG TACCGCTTAC GCCCAGCAAG CCGGACTTCT GGCCGCCAAG
GCTCACTACG ACAAAGGCAA TGTCGATGCC GCCCGTGCCG CCCTGACGTG GGTTGCCGAC
AAAGCAGCCG ATCCGGGCTA CCAGGCGGTG GCCAAACTGC GCCTTGCCGG AATCCTGCTT
GAAAAGAAAG CGTATGACGA AGCGCTGCAG CAGGTGTCGG GCGCCTTTCC GAAAGATTTT
TCAGGCCTGG TTGCTGACCG GCGCGGTGAC ATCCTGATGG CGCAAGGCAA GAAAACCGAA
GCCAAGGCCG AGTACGAAAA AGCCTACAAG GCGCTTGACG AGCGTGCCGA ATACCGGCGC
CTGGTCGAGG TCAAGCTCAA TGCGCTGGGT GTTGATCCCG CTGCCGGGCA GGTCAAGCTT
GCAACTGCCG AAAATGCCGG AGCGAATAAA TGA
 
Protein sequence
MAQHLDLEEQ EQLDELKHFW KQYGNLITWA LIVVLGAFAA WNGYQYWQRS QAAQASVMFD 
EIERAVQSGE TARIDRALAD MKERFGSTAY AQQAGLLAAK AHYDKGNVDA ARAALTWVAD
KAADPGYQAV AKLRLAGILL EKKAYDEALQ QVSGAFPKDF SGLVADRRGD ILMAQGKKTE
AKAEYEKAYK ALDERAEYRR LVEVKLNALG VDPAAGQVKL ATAENAGANK