| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1872 |
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| Symbol | ispG |
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| ID | 4688101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1995694 |
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| End bp | 1996968 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834879 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_982103 |
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| Protein GI | 121604774 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAACCT GTCTTCCCAT TGAGTCCGCT TTTCCCAAAG CGCATCATTC GCTGCAGTCC
CGGGTTGTCT GGGGTTCGCG GGTGGTTACC GTCGGTGGCG ATGCGCCGGT GCGCGTCCAG
TCCATGACCA ATACCGACAC CGTGGATGCG ATTGGCACGG CCATTCAGGT CAAGGAGCTT
GCCTTGGCCG GATCAGAAAT GGTTCGCATC ACGGTCAACA CGCCTGAGGC CGCAGCAGCC
GTTCCCTATG TGCGTGAGCA ACTCGACCGC ATGGGAATTG ATGTGCCGCT GATTGGCGAC
TTTCACTACA ACGGCCATCG CCTGCTGACC GATTACCCCG CCTGCGCCCA GGCGCTGTCC
AAGTACCGCA TCAACCCCGG CAACGTGGGC AAGGGCAACA AGCGCGATAC GCAGTTCGGC
CAGATGATTG AGGCGGCCCT GCGCTGGAAC AAGGTCGTTC GTATCGGTGT GAACTGGGGC
AGCCTCGACC AGGAGCTGCT TGCCAGCCTG ATGGATGAAA ACAGTGCGCG TAGCGCGCCC
TGGGATGCAC GGCAGGTGAT GTATGAAGCC TTGATTACCT CTGCCATTGA TTCTGCCCAG
CGCGCCGAAG ACATGGGAAT GCGCCGCGAC CAGATCATCC TGTCGTGCAA GGTCAGCGGC
GTCCAGGATC TGATTTCCGT GTACCGCGAA CTGGCCAAAC GGACCGATCA CGCGCTTCAC
CTGGGCCTGA CCGAGGCGGG CATGGGCACC AAGGGCACGG TGGCATCGGC CACGGCGCTC
TCGATTTTGC TGCAGGAAGG TATCGGAGAC ACCATTCGTG TCTCCTTGAC GCCCCAGCCG
GGCGAGGCCC GCACACAGGA AGTGGTCATC GCTTCCGAAA TCCTGCAGGC CCTGGGCTTG
CGGACATTTG TACCCAGCGT GACGGCATGC CCCGGCTGCG GCCGCACCAC CAGCACCACG
TTCCAGGAAC TAGCCAAGCA GATTGACGAT TTCCTGCGCG CGCAGATGCC GGTCTGGCGC
GAACAGTATC CGGGCGTCGA GGGCCTGCGG GTCGCCGTGA TGGGCTGCAT CGTCAATGGT
CCGGGTGAAA GCAAGCATGC TGACATCGGC ATCAGCCTGC CCGGCTCAGG CGAAGCGCCA
GCGGCGCCGG TATTTATTGA TGGCGAAAAA AGACTGACCC TGCGCGGCGA CAACATCGCG
CAGGAGTTCC AGGTCATCGT TGAAAACTAC ATTGAAAAAC GCTTTGGCGC GCACGCCGTC
GCCCAAGCTT CCTGA
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| Protein sequence | MQTCLPIESA FPKAHHSLQS RVVWGSRVVT VGGDAPVRVQ SMTNTDTVDA IGTAIQVKEL
ALAGSEMVRI TVNTPEAAAA VPYVREQLDR MGIDVPLIGD FHYNGHRLLT DYPACAQALS
KYRINPGNVG KGNKRDTQFG QMIEAALRWN KVVRIGVNWG SLDQELLASL MDENSARSAP
WDARQVMYEA LITSAIDSAQ RAEDMGMRRD QIILSCKVSG VQDLISVYRE LAKRTDHALH
LGLTEAGMGT KGTVASATAL SILLQEGIGD TIRVSLTPQP GEARTQEVVI ASEILQALGL
RTFVPSVTAC PGCGRTTSTT FQELAKQIDD FLRAQMPVWR EQYPGVEGLR VAVMGCIVNG
PGESKHADIG ISLPGSGEAP AAPVFIDGEK RLTLRGDNIA QEFQVIVENY IEKRFGAHAV
AQAS
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