| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1867 |
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| Symbol | |
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| ID | 4688376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1990586 |
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| End bp | 1992169 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639834874 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_982098 |
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| Protein GI | 121604769 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.919575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAC AAGACAACCC TGCCAGCGAA GCCCCGCCAA TGCCAGAATA TGAATCAAAT
AAGGTTGTAC CGCACGACCC ACCAGCACAG TTAGCTCCTG ATTTGATAGC GAGTGATGGG
CGTGGCAAGG TTTCCCCATC GCAGGCCACT GCACGGCGGC CTGGCTCGAA ACAGGTGCCC
GCCACCATTC GCTTTGAAGA TGTGATCACT GGGCAGTTCG ATGCCGACGA AGACGATGTG
GCGCTTGATT TGCCCAAGCG CGTGCTGTCG CCACAGCCGG AAACCCCCAA GCTTCACAAA
GTGCTGGCTC AGGCCGGACT GGGTTCGCGA CTTGAAATGG AGCAACTGAT TCTCGAAGGG
CGAATTTCCG TCAATGCCGA GCCCGCCCAC ATCGGTCAGC GCATCCAGTT TGGCGACACC
GTCAAGGTCA ATGGCAAGCC CATCCGCGTC CAGATCGATC CGCCGCCGCC CCGCGTGATT
GCCTATCACA AGCCTGCCGG CGAAGTGGTC ACGCACGACG ATCCGCAAAA TCGCCCGACC
GTGTTCCGGC GCCTGCCCAA GCTCTTTCAG GGCAAGTGGC AGTCAGTCGG GCGGCTGGAT
TTGAATACCG AAGGCCTATT GCTCTTGACC AGTTCCGGTG AGTTGGCCAA CAAGCTGATG
CACCCGCGCT TCGGACTGGA ACGCGAATAT GCCGTGCGGG TGCTTGGTGC GCTGAACAAT
GAAGAGAAAA AACGCCTGCT TGACGGCGTG ACCCTCGACG ATGGCGTGGC GCAGTTCGGC
TCGATTGAAG CCGGTGGCGG CGAAGGCGCC AACTGCTGGT ACCGGGTTAC GATTTCAGAA
GGACGCAACC GCGAGGTACG TCGCATGTTT GAAGCGGTGG GCCATGCCGT GAGTCGCCTC
ATCCGTATTC GCTATGGCGC CATGGTGCTG CCGCGCGGCC TCAAGCGGGG TGCGTTTGTC
GAACTCGACG AGAACGATAT CCATGCGCTG ACCAGCGCGG TCAGCCGCTC TGAATCACGG
CCTGATCCGC GAGGCGAAGC TGCAGGTCCG GGTCAGTCCG AGGGGGAGGG GGGTGTTCAA
CAGCGACGTG GCCCCCGCAG GAACGAGCGT CCCCGCAGTG GCGCTGGACG GCCACGCAAT
CTTGACGCAG GGCAAAGTGG TGTCCAGCAG CCATTGGATG ATTCGCAGCC GCCAATGAAC
CGAACAGATT CAGCACCGCG AGGCAACCGG CGTAATGCCG GTGGCGGGGC CGGCCCGCGG
GGCCGCAGTC AAGGGGGCAA TTCTGGCCCG GGTGCGCGTT TTGGACAAGC CGGTGCTGGC
GGCCCGCAAG GTCAAAAGCG ACGCGATGAC CGTAACCCAC GCAGCGATAA ATCGGCTGGC
GGCTCCCAGC CCGACCCCAT GAAAACCTCA TTTGGTTATA TCGGTGCCGA TACCTTCACC
CGGCAGCGGC AGGACCAGGG CCAGCGTCGT GGGGGCGGGG GCGGCAATGC AGGCGGTTTT
GGCGGAACCA GTGGTGGCCC GCGCCGCAAT GGTGGCAATA CAGGTGGAAA CCGTGGTGGC
GGCAATCGGG GCGGAAATCG CTAA
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| Protein sequence | MKPQDNPASE APPMPEYESN KVVPHDPPAQ LAPDLIASDG RGKVSPSQAT ARRPGSKQVP
ATIRFEDVIT GQFDADEDDV ALDLPKRVLS PQPETPKLHK VLAQAGLGSR LEMEQLILEG
RISVNAEPAH IGQRIQFGDT VKVNGKPIRV QIDPPPPRVI AYHKPAGEVV THDDPQNRPT
VFRRLPKLFQ GKWQSVGRLD LNTEGLLLLT SSGELANKLM HPRFGLEREY AVRVLGALNN
EEKKRLLDGV TLDDGVAQFG SIEAGGGEGA NCWYRVTISE GRNREVRRMF EAVGHAVSRL
IRIRYGAMVL PRGLKRGAFV ELDENDIHAL TSAVSRSESR PDPRGEAAGP GQSEGEGGVQ
QRRGPRRNER PRSGAGRPRN LDAGQSGVQQ PLDDSQPPMN RTDSAPRGNR RNAGGGAGPR
GRSQGGNSGP GARFGQAGAG GPQGQKRRDD RNPRSDKSAG GSQPDPMKTS FGYIGADTFT
RQRQDQGQRR GGGGGNAGGF GGTSGGPRRN GGNTGGNRGG GNRGGNR
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