Gene Pnap_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1845 
Symbol 
ID4689683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1967170 
End bp1967613 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID639834851 
Producthypothetical protein 
Protein accessionYP_982076 
Protein GI121604747 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.128733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.528638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG GCGCAGAAAT CCCTTTCGTC ACGCACCTCG GCTTCAGGCT GGAACTGTTT 
GAAGGCGGCG AGTCGGCCAT TGGCTACACG CCGCTGCCCG AGCATCTCAA TTCGTTTGCC
GTCACGCATG GCGGCGCCTG CATGACGCTG CTCGACGTGG CCATGGCCGT GGCCGCGCGC
AGCGTGCAAA AGGACATGGG CGTGGTCACC ATCGAGATGA AAACCAGCTT CATGCGGCCC
GCGCCCGGCG ACGGCAGCCC GCTCACGGCC AGGGGCCGGC TGGTGCATCG CACCCTGTCG
CTGGCGTTTG CCGAGGCCAC GATTTACGAT GCCCAAGGCC AGGCCTGCGC CCACTCGACC
GGAACCTTCA AGTACGTCAG GCGCAAGGCG AGCGAAGCGG GGAATGCGCC CGATTCGCCC
GTCAGGCCGA TTTCAACCGA CTGA
 
Protein sequence
MNFGAEIPFV THLGFRLELF EGGESAIGYT PLPEHLNSFA VTHGGACMTL LDVAMAVAAR 
SVQKDMGVVT IEMKTSFMRP APGDGSPLTA RGRLVHRTLS LAFAEATIYD AQGQACAHST
GTFKYVRRKA SEAGNAPDSP VRPISTD