| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1842 |
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| Symbol | |
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| ID | 4689797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1962822 |
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| End bp | 1964921 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834848 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_982073 |
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| Protein GI | 121604744 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.358263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCC TCTACGAAGT CCACGGCTCG GTGGCGCTGA TCACCCTGAG CAATCCGCCG
GTCAATGGCC TGGGTTACGC CACCCGCGTG TCGCTGACCG ACAACCTGCA AAAGGCCAAC
GACGACGACG CCGTCAAGTC CATCGTCATC ACCGGCGCCG GCAAGGCGTT TTCGGGCGGC
GCCGACATCA ACGAATTCGG CTCGCCCAAG GCGGTGCAGG AACCCAACCT GCTCAGCGTC
ATCCTGGCGA TTGAAAACTC GTCCAAGCCG GTGGTGGCCG CGATTCATTC GGTCTGCATG
GGCGGCGGGC TGGAACTGGC GCTGGGCTGC CATTACCGCA TCGCCGCGCC CGGTTGCAGC
ATCGCCCTGC CCGAAGTCAA GCTCGGCCTG CTGCCGGGCG CGGGCGGCAC CCAGCGCCTG
CCGCGCGCCT TGGGCGTGGA GCCAGCGCTG AACATGATCG TCAGCGGCGA GTCGGTCAAG
AGCGACATGC TGGCGCAAAT CCCCGGCCAG AAGCTGTTTG ACCGGATGGC GTCTTCCGTG
GAAACGCTGG CTGACGAGGC GTTTGCCTTT GCGCAGGCGA TTGCCGACAC GCGCCCCTTG
CCGCTGGTGC GCAGTCTGCC GTGCAAGCAC CGCAACGGCG ATGCCTATTT CCAGTTTGCC
CGCAACATGG TCAAGGGCAT GGCGAAGAAT TTCCCGGCGC CGCTCAAGTG CGTCGATGCG
GTGGAGGCGG CGACGAAGCA GAAGTTTGAC GAAGGCATGC GGCTGGAGCG CGAGTTTTTC
ACCAACCTGA TGTTTACGCC TGAAAGCCGC GCGCTGCGGC ACATTTTCAT GGCCGAACGC
GCTGCCTCAA AAATCCCCGA TTTGCCGGCA GACACGCCGA AACGCGAGAT CAATTCGGTT
GCCGTGATTG GCGCCGGCAC CATGGGCGGC GGCATTGCGA TGAACTTCCT GAACGCCGGC
ATCCCGGTCA AGATGCTGGA GATGAAGCCC GAGGCGCTGG AGCGCGGCAT CGCCACGATT
CGCAAGAACT ACGAGTCGCA GGTCAAGAAG GGCAAGCTGA AGCAGGACAA ATACGAGCAG
CGCATGGGAC TGCTCAGCAC CACGCTGAGC TACGGCGACC TCAAAGATGC CGATCTGGTG
ATCGAAGCCG TGTTCGAGGA CATGGGCGTG AAGCAAGCCG TCTTCAGGGA ACTCGACCGT
GTTATGAAGC CCGGCGCGAT CCTGGCATCC AACACCTCGA CGCTCGATCT GAACCAGATC
GCCTCGTTCA CCCAGCGCCC CGAGGATGTC GTGGGCCTGC ATTTCTTCAG CCCGGCCAAC
ATCATGAAGC TGCTCGAAGT CGTGCGCGGC GAGAAAACCG GCAAGGACGT GCTGGCCACG
GTCATGGCGA TCGCCAAGAA AATCCGCAAG ACCGCCGTGG TGTCCGGCGT GTGCGACGGC
TTCATAGGCA ACCGCATGAT CGAGCAGTAC GGCCGCCAGG GCGGTTTTTT GCTCGACGAG
GGCTGCACGC CCGAACAGGT GGACAAGGCC ATCGAGAAAT TCGGTTTTGC CATGGGACCG
TTCCGCATGG GCGACCTGGC CGGCAACGAC ATCGGCTGGG CCATCCGCAA GCGCCGCTAC
CAGGAAAAGC CGGACATGAA ATACAGCAAG ACCGCCGATT TGCTGTGCGA GAAGGGTCGC
TTCGGGCAAA AGACCGGCGC CGGCTGGTAC GACTACGTGG CCGGCAAGCG CGACGCGATT
CCGAACCAGG AAGTCGTCAA GATGATCGAG GAGCACCGAG CTTCACTGGG CATCACGCCG
CGCAAGATTT CGGACGAGGA AATCGTCCAG CGGCTGGTGT ATTCGCTGGT CAACGAGGGC
GCGCACATCC TGGAAGAGGG CATTGCGTCC AAGGCCAGCG ACATCGACAT GGTGTATTTG
ATGGGCTACG GTTTCCCGAT TTACCGGGGC GGCCCGATGC TGTACGCCGA CCAGGTCGGC
CTCTTCAACG TGGTGCAGGC GATGAAGCGC TTTGCGAAAA ATCCGCTCGA CGACGCCGGT
TTCTGGAAGC CCGCGCCGCT GCTGGCACGG CTCGCCGCCG AAGGCAAGAC CTTTAACTGA
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| Protein sequence | MTTLYEVHGS VALITLSNPP VNGLGYATRV SLTDNLQKAN DDDAVKSIVI TGAGKAFSGG
ADINEFGSPK AVQEPNLLSV ILAIENSSKP VVAAIHSVCM GGGLELALGC HYRIAAPGCS
IALPEVKLGL LPGAGGTQRL PRALGVEPAL NMIVSGESVK SDMLAQIPGQ KLFDRMASSV
ETLADEAFAF AQAIADTRPL PLVRSLPCKH RNGDAYFQFA RNMVKGMAKN FPAPLKCVDA
VEAATKQKFD EGMRLEREFF TNLMFTPESR ALRHIFMAER AASKIPDLPA DTPKREINSV
AVIGAGTMGG GIAMNFLNAG IPVKMLEMKP EALERGIATI RKNYESQVKK GKLKQDKYEQ
RMGLLSTTLS YGDLKDADLV IEAVFEDMGV KQAVFRELDR VMKPGAILAS NTSTLDLNQI
ASFTQRPEDV VGLHFFSPAN IMKLLEVVRG EKTGKDVLAT VMAIAKKIRK TAVVSGVCDG
FIGNRMIEQY GRQGGFLLDE GCTPEQVDKA IEKFGFAMGP FRMGDLAGND IGWAIRKRRY
QEKPDMKYSK TADLLCEKGR FGQKTGAGWY DYVAGKRDAI PNQEVVKMIE EHRASLGITP
RKISDEEIVQ RLVYSLVNEG AHILEEGIAS KASDIDMVYL MGYGFPIYRG GPMLYADQVG
LFNVVQAMKR FAKNPLDDAG FWKPAPLLAR LAAEGKTFN
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