| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1838 |
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| Symbol | |
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| ID | 4688986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1958853 |
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| End bp | 1959806 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834844 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_982069 |
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| Protein GI | 121604740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.116959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGG AGTTCTTCAC CATTTCCCTG CTCAACGGGC TGAGCTACGG GCTGCTGCTG
TTCATGCTCA GCGCGGGGCT GACGCTGATC TTCAGCATGA TGGGCGTGCT CAACTTCGCG
CATGCTTCCT TCTACATGGT GGGCGCCTAT GTGGCCTACA GCCTGTCGCA GGTGATGGGT
TTCTGGTGGT CGCTGCTGGC CGCGCCGCTG GTGGTGTTTG CGCTGGGCGC GGCCTTCGAG
CGCTTTTGCT TGCGCCGGGT CCATCAATTC GGCCATGTGC CCGAATTGCT GGTGACGTTT
GGCCTGTCCT ACCTGCTGCT GGAGGTCGTC CAACTCATCT GGGGCCGCGC GGCGGTCAAT
TACGCCTTGC CCGGTGAATT GCAGGGGCCG CTGTTCACCG TGTTCGGCAT CCACTTTCCC
AAATCGCGCG CCTTCATCAT GGCCATCTCG CTGGTCATGC TGGCCGGCAT CTGGCTGCTG
CTCACGCGCA CGCGTATCGG GCTGGTGATC CAGGCGGCGC TGACGCACCC GGAAATGGCG
CAGGCGCTGG GCCACAACGT GCCGCGCATC TTCATGCTGG TGTTCGGCGG CGGCGCGGCG
CTGGCGGGGC TGGCCGGCGT GGTCGGCGGC AACACCTTCA TCACCGAGCC CGCCATGGCC
GGCTCGGTCG GCGCGATCAT CTTCGTGGTG GTCGTGGTCG GCGGCCTGGG CTCGCTCAGC
GGGGCTTTTC TGGCGTCGAT TCTGATCGGG CTGATCCAGA CCTTCGCGGT CGCCATGGAC
CAGTCGCTGA TGACGCTCCT GGGTCGCTTC AGCGTCGTGG TGACGCCCGA CACCTTCGGC
TATCCGCTGC TCAAGCTGAC CATTTCGCAG GTCGCGCCCA TCCTGCCATT TTTGCTCCTG
GTGCTGATGC TGATCTTCCG GCCCCGAGGC CTTCTGGGCA CGCGGGAAGG TTAA
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| Protein sequence | MTLEFFTISL LNGLSYGLLL FMLSAGLTLI FSMMGVLNFA HASFYMVGAY VAYSLSQVMG
FWWSLLAAPL VVFALGAAFE RFCLRRVHQF GHVPELLVTF GLSYLLLEVV QLIWGRAAVN
YALPGELQGP LFTVFGIHFP KSRAFIMAIS LVMLAGIWLL LTRTRIGLVI QAALTHPEMA
QALGHNVPRI FMLVFGGGAA LAGLAGVVGG NTFITEPAMA GSVGAIIFVV VVVGGLGSLS
GAFLASILIG LIQTFAVAMD QSLMTLLGRF SVVVTPDTFG YPLLKLTISQ VAPILPFLLL
VLMLIFRPRG LLGTREG
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