Gene Pnap_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1820 
Symbol 
ID4686989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1937706 
End bp1938539 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID639834826 
Productmethionine aminopeptidase, type I 
Protein accessionYP_982051 
Protein GI121604722 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTA CTTACAAAAA TGCAGAAGAG ATTGAGCACC TGCGCGTGGC GGGCAGGCTC 
GCCGGCGAAT TGCTCGACTA CCTCACCCCT TTCGTCAAAC CAGGCGTGAC GACCAACGAA
ATCAACCAGC TGGCCCACGA CTACATGGTC GAGGTGCAGG GCACCGTTCC GGCCACGCTG
GGCTATGGTC CGCCCAACTA CCCGCCCTAT CCGAAATCCC TGTGCACGTC GGTCAATCAC
CAGGTGTGCC ACGGCATTCC CAACGACAAG CCGCTGAAAA AAGGCGACAT CGTCAACCTC
GATGTGACCG GCATCAAGGA CGGCTGGCAC GGCGACAGCA GCCGCATGTT CCTGGTGGGC
GAATGCTCGA TTGCCGCCAA GCGGCTGTGC CAGGTCACCT ACGAAGCCAT GTGGCAGGGC
ATCATGCGCG TCAAGCCGGG CGTGCGGCTG GGCGATATTG GCTTTGCCAT CCAGACCTTT
GCCGAAAAGC ACGGCTACTC CGTGGTGCGC GAATTTTGCG GCCACGGCAT TGGCCGCAAA
TTCCATGAAG AGCCGCAAGT GATGCATTAC GGCCGTCCCG GCACCATGGA AGAACTCAAG
CCCGGCATGG TGTTCACCAT CGAGCCCATG ATCAACATCG GCAAGCGCGA CATCAAGGAC
GGCGCCGAAA AAGACGGCTG GAGCATCGTC ACGCGCGACC ATTCGCTCTC GGCGCAGTGG
GAGCACATGG TTGCGGTGAC CGAAACCGGC TATGAAGTAC TCACACTGTC GGCCGGCAGC
CCGCCGATTC CGGACTTCGT GCCGCAACAC CAGCCCGCGC AAGTCAACGC CTGA
 
Protein sequence
MSITYKNAEE IEHLRVAGRL AGELLDYLTP FVKPGVTTNE INQLAHDYMV EVQGTVPATL 
GYGPPNYPPY PKSLCTSVNH QVCHGIPNDK PLKKGDIVNL DVTGIKDGWH GDSSRMFLVG
ECSIAAKRLC QVTYEAMWQG IMRVKPGVRL GDIGFAIQTF AEKHGYSVVR EFCGHGIGRK
FHEEPQVMHY GRPGTMEELK PGMVFTIEPM INIGKRDIKD GAEKDGWSIV TRDHSLSAQW
EHMVAVTETG YEVLTLSAGS PPIPDFVPQH QPAQVNA