| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1814 |
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| Symbol | |
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| ID | 4687255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1927165 |
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| End bp | 1930710 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834820 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_982045 |
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| Protein GI | 121604716 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCTCA ATTCGATCAA GTTAGCAGGT TTCAAGTCAT TCGCCGATCC GACCAATTTC
ATGCTGCCGG GGCAGCTGGT CGGTGTGGTC GGCCCCAACG GCTGCGGCAA ATCGAACATC
ATGGATGCCG TGCGCTGGGT GCTGGGCGAG AGCAAGGCGT CCGAGCTGCG CGGCGAGTCG
ATGCAGGACG TGATCTTCAG CGGCACCACC ACCCGCAAGT CGGCCAGCCG CGCCAGCGTG
GAACTGGTGT TCGACAATGC CGACCACCGC GCCGGCGGCC AGTGGGGCCA GTTTGCTGAA
ATCGCCGTCA AGCGGGTGCT GACGCGCGAC GGCACCTCCA GCTACTACCT GAACAACCAG
CCGGTGCGCC GCCGCGACGT GCAGGACGTG TTTCTGGGCA CCGGGCTGGG GCCGCGCGCC
TACGCCATCA TCGGCCAGGG CACGATCAGC CGCATCATCG AATCCAAGCC CGAGGAACTG
CGCCTGTTCC TCGAAGAAGC CGCCGGTGTG TCCAAATACA AGGAACGCCG CCGCGAAACC
GCCAACCGAT TGAGCGATAC GCGGGAAAAC CTGACGCGCG TCGATGACAT CCTGCGCGAA
CTCAATGCCA ACCTGGAGCG GCTCGAAAAG CAGGCCGAAG TTGCCCTGCG CTACAACGCG
CTGCAGGCCG CCGGCACTTT AAAACAGCAC CAGCTGTGGT TTTTGAAGCG CACCGAGAGC
GAAGCCGACC AGGCCAGGGT CCGGCTGGAC GCCGAAAAAT CGGTGAATGA CCTTGAAAGC
CGTATTGCCG ACCTGCGCCA CATCGAAGCC GACCTGGAAA CCATCCGCCA GGCGCACTAT
GCGGCGGGCG ACCAGGTCAA CCAGGCGCAA GGCAGGCTCT ACGAGGCCAG CGCCGAGGTG
GGGCGGCTGG AGGCTGAAAT CCGCTTTGTG GTCGATGGCC GCAAGCGCGT CGAGCAGCGC
CTGGTCCAGC TGACGGAGCA GACCGCCCAG TGGGCGGCGC GCCGCGAGGA TGCGGCCATC
GAATCCGAAA GCCTGGCCGA AAAAGCCTTT GAGGCCGAAG AAAAAGCTGA ACTGCTGGCC
GCGCAGCTTG AGGAGCAGCA GGACCAGCTG CCGGCGCTCG AAGAAGCGCT GCGCCAGGCC
CAGGCCAAGG CCAATGAGCA GCGCGCCGGC GTGGCGCAGG TCCAGCAGCA GCTCCAGGTG
CTGGCCGCCG AGCAGCGCCA TGTTGAAGAG CAGCTGCGCG CGCTGGGCTT GCGCCACGAG
CGCCTGTCAG CCGACCGCAA GGCGCTCAAT GCGCCCGACG AGGCGCGGCT GGCCAGCCTG
GCCGCGCAAC TGGAACATGC CCAGGAAGCG CAGGCCGTGG CCCAGGCCAG ATTGCAGGAA
CTGACCGAAA CCGTGCCGCA GCTCGATGAA GCGCGGCGCA GCCTGCAGCA AGCGGCCAAT
GCCGAATCGG CCCGGCGCGC CGACCTGTCG GCGCGGCTCG AAGCGCTCAA GGCGCTGCAG
GAAAAAGTCA GGACCGACGG CAAGCTCAGG CCCTGGCTGG CCCGGCATGG TCTTGAAAAT
CTGCAGGCAC TGTGGAGCCG CCTGCACATC GAGCAGGGCT GGGAAAACGC GCTCGAAGCC
GCCTTGCGCG AGCGCCTGGG CGCGCTGGAA GTCAGCCGCC TCGACATCGT GCGCGGCTTT
GCCGGCAGCG ACCTGCGCGG CAAGCCTGAA GGGCCGCCGG CCAAGCTGGC GTTTTATTCG
CCGCCGAATG CAGCCGCTCC CGGCTATTGC AACCCGGCGC TCAACCTCAA GCCGCTGGCT
GACTTGCTGC GCCTGAACGA TGCCGGCCTG TCGGCGCTGC TGTCCGGCTG GCTGCACGGC
AGCTACACCG CGCCGACGCT CGACGACGCC CTGGCCGCGC GCGAGCGCCT GCTGCCGGGC
GAGACGATCT ACGTCATGGG CGGCCATGCC GTCACCGCGC ACAGCGTGAG CTTTTATGCG
CCCGACTCCG AGCAGGCCGG TTTGCTGGCC CGGGCGCAGG AGATTGAAAA CCTGGAAAAA
GGCCTGCGCG CGCAACTGCT GATCAGCGAA GAAGCCAAAT CGGCATTGAC CCGCGCCGAG
GCCGCTTACG TTGACGCCAG CCAGCGCCTG GCCACCGCCC GCCGCGAAGC CGCCGAAGGC
CAGAACCAGA GCCACGCGCT GCAGGTCGAA GTGCTGCGCC TCACGCAACT GGCCGAGCAG
GCGCGCGCCC GCAGCCAGCA GATTCAGGCC GACATGGCCG AAATCGAAGC CCAGTTGGAG
GAATTGCAGG AGCGCAAGAT CACCGCCGAA GCGCGTTTCG AGGAACTCGA CATGCAACTG
GCCGACAGCC AGGAGCGCCA TGCCCAGCTT GACGACCGGG TGATAGCCAC CGAGCGCCGC
CGCGCCGAAT CGCGCGAGCA GCAGCGCACG CTGGAGCGGC AGTTGCAGGA AGCGCAGTTT
GCGCTGCGCA GCCTGGCCGC GCGCCGTGAA GAGCTGGCGC GTTCCATAGG TATCGCCGCG
CAACAAGCGG CGTCGATTGC CGGTGAAGAA GAGCGTGCCC GCCACGAACT GCTGCGGCTC
AACGACGCCG CCGCCCAGGG CGGACTGCAG GACGCGCTGA ACGCCAAGCT GGCGCGCGAA
GCCGACCTGA GCGCCCAGCG CAGCCAGTAC GACGGCCTGA CCCACCAACT GCGCGCCAGC
GATGAACGGC GGCTGCAGCT GGAGCGTGAA CTCGAACCCT TGCGCCAGCG CATCACCGAA
TTCCAGCTCA AGGAGCAGGC CGCGCGGCTG GGTTTCGAGC AATATGCGCA GCTGCTGACG
GACGCGCAGG CGGATTTGCC GGCGGTGGCG GCGTCGATCC AGGCCGGCAA CGTGCGCATG
ACCGGCCTGC AGGGCGAGAT TGACCGCATC CAGCGCGACA TTCACGCGCT GGGCGCGGTG
AACCTGGCCG CGCTCGACGA ACTGGGCGTC GCCCGCGAAC GCAAGCAGTT CCTTGATGCG
CAGTCGGCCG ATCTGAACGA GGCGATGGCG ACGCTCGAAG ACGCGATCCG CAAGATCGAC
ATGGAAACGC GCGACTTGCT GTCCAGCACC TTCGAGGCCG TCAACGGGCA TTTCGGCCGC
ATGTTCCCGG AACTGTTTGG CGGCGGCAAT GCCCGGCTGG TGATGACCGG CGAGGAAATC
CTCGACGCCG GCGTTCAGGT CATGGCGCAG CCGCCGGGCA AGAAGAACCA GACGATTCAC
CTGCTGTCGG GCGGCGAGAA GGCGCTGACG GCGATTGCGC TGGTGTTCGC GATTTTCCAG
CTCAATCCGG CGCCGTTTTG CCTGCTCGAT GAGGTCGATG CGCCGCTGGA CGATGCCAAT
ACCGAGCGTT ATGCCAAACT CGTGTCCAGC ATGAGCAAGG AGACGCAATT TTTATTCATC
AGCCACAACA AGATCGCCAT GGAAATGGCC GAGCAGCTGA TCGGCGTGAC CATGCAGGAG
CAGGGCGTGT CCCGCATCGT TGCCGTCGAT ATGCAAGCCG CCCTGAGTCT TGCCGAAGCA
GCCTGA
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| Protein sequence | MRLNSIKLAG FKSFADPTNF MLPGQLVGVV GPNGCGKSNI MDAVRWVLGE SKASELRGES
MQDVIFSGTT TRKSASRASV ELVFDNADHR AGGQWGQFAE IAVKRVLTRD GTSSYYLNNQ
PVRRRDVQDV FLGTGLGPRA YAIIGQGTIS RIIESKPEEL RLFLEEAAGV SKYKERRRET
ANRLSDTREN LTRVDDILRE LNANLERLEK QAEVALRYNA LQAAGTLKQH QLWFLKRTES
EADQARVRLD AEKSVNDLES RIADLRHIEA DLETIRQAHY AAGDQVNQAQ GRLYEASAEV
GRLEAEIRFV VDGRKRVEQR LVQLTEQTAQ WAARREDAAI ESESLAEKAF EAEEKAELLA
AQLEEQQDQL PALEEALRQA QAKANEQRAG VAQVQQQLQV LAAEQRHVEE QLRALGLRHE
RLSADRKALN APDEARLASL AAQLEHAQEA QAVAQARLQE LTETVPQLDE ARRSLQQAAN
AESARRADLS ARLEALKALQ EKVRTDGKLR PWLARHGLEN LQALWSRLHI EQGWENALEA
ALRERLGALE VSRLDIVRGF AGSDLRGKPE GPPAKLAFYS PPNAAAPGYC NPALNLKPLA
DLLRLNDAGL SALLSGWLHG SYTAPTLDDA LAARERLLPG ETIYVMGGHA VTAHSVSFYA
PDSEQAGLLA RAQEIENLEK GLRAQLLISE EAKSALTRAE AAYVDASQRL ATARREAAEG
QNQSHALQVE VLRLTQLAEQ ARARSQQIQA DMAEIEAQLE ELQERKITAE ARFEELDMQL
ADSQERHAQL DDRVIATERR RAESREQQRT LERQLQEAQF ALRSLAARRE ELARSIGIAA
QQAASIAGEE ERARHELLRL NDAAAQGGLQ DALNAKLARE ADLSAQRSQY DGLTHQLRAS
DERRLQLERE LEPLRQRITE FQLKEQAARL GFEQYAQLLT DAQADLPAVA ASIQAGNVRM
TGLQGEIDRI QRDIHALGAV NLAALDELGV ARERKQFLDA QSADLNEAMA TLEDAIRKID
METRDLLSST FEAVNGHFGR MFPELFGGGN ARLVMTGEEI LDAGVQVMAQ PPGKKNQTIH
LLSGGEKALT AIALVFAIFQ LNPAPFCLLD EVDAPLDDAN TERYAKLVSS MSKETQFLFI
SHNKIAMEMA EQLIGVTMQE QGVSRIVAVD MQAALSLAEA A
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