| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1813 |
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| Symbol | |
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| ID | 4687749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1925570 |
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| End bp | 1926778 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834819 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_982044 |
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| Protein GI | 121604715 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCC TGCTTTCCCG CCTTCAGCCT TACCCCTTCG AGCGGCTGCG CCAGCTGCAT
GCCGGCGTCA CCCCCAATCC GGCGTATTCG CCCATCAGCC TGGGCATCGG CGAGCCGCGC
CATGCGACGC CGCAATTGAT TAAAGATGCG CTGACCGGCA GCCTGGCCGG GCTGGCCAGC
TACCCCGGCA CGCTGGGCGA ACCCAAATTG CGCCAAGCCA TGAGCGACTG GCTGGCGCGG
CGCTACGGCG GCCTGAGCGT TGATCCGGCG ACGCAAATCC TGCCGGTCAA CGGCTCGCGC
GAGGCGCTGT TCGCGCTGGC GCAGACGGTG ATTGACCCCG GCCAGCCCGG CGCGACGGTG
GTCTGCCCGA ATCCTTTTTA TCAAATCTAC GAAGGCGCGG CGCTGCTGGC CGGCGCGCAG
CCGTGGTTCG CGCCCAGCGA GCCGGCGCGC AACTTCGGCA TCGACTGGGC CGCCGTGCCC
GCAGCCGTGT GGGGAAAAAC CCAGTTGCTG TTTGTCTGCT CGCCCGGCAA CCCGACCGGC
GCGGTGATGG GCCTTAGCGA ATGGGAACTG CTGTTCCGCT TGAGCGACCA GTACGGCTTC
GTGATCGCCT CGGACGAGTG CTACAGCGAG ATTTATTTCC GCGACGAGCC GCCGCTGGGC
GGCCTGGAAG CGGCAGCGCG GCTTGGCCGG CATGACTTCA AGAACCTGAT TGCGCTGACC
AGCCTGTCCA AGCGCAGCAA CGTGCCCGGC CTGCGCAGCG GCTTTGTGGC CGGTGACGCG
GCCATCATCA AGTCGTTTTT GCTCTACCGC ACCTACCACG GCAGCGCCAT GAGCCCCATC
GTGCAGGCCG CCAGCATCGC CGCCTGGGCC GACGAGGCGC ATGTGATTGA CAACCGCGCC
CAGTACCGCG AGAAGTTCGC GCAGGTCACG CCCATGCTGG CCGAAGTGAT GGACGTGGCC
TTGCCCGACG CCGGTTTTTA CCTGTGGGCG GCTGTCCCTG ATGCGTTCAA GGGTTCGGAC
ACCGCGTTTT CGCGCGAGTT GCTCGCTCTT TACAATGTCG TCGTGCTGCC GGGCAGTTAC
TTGGCGCGCG ATGCGCAGGG ATGCAACCCC GGCGCCGGCC GGATCCGCAT GGCGCTGGTG
GCGCAAACCG CCGAATGCGT CGAAGCCGCC CAGCGCATCG TTCAATTCAT TCAATCCAAA
GTTCACTGA
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| Protein sequence | MNPLLSRLQP YPFERLRQLH AGVTPNPAYS PISLGIGEPR HATPQLIKDA LTGSLAGLAS
YPGTLGEPKL RQAMSDWLAR RYGGLSVDPA TQILPVNGSR EALFALAQTV IDPGQPGATV
VCPNPFYQIY EGAALLAGAQ PWFAPSEPAR NFGIDWAAVP AAVWGKTQLL FVCSPGNPTG
AVMGLSEWEL LFRLSDQYGF VIASDECYSE IYFRDEPPLG GLEAAARLGR HDFKNLIALT
SLSKRSNVPG LRSGFVAGDA AIIKSFLLYR TYHGSAMSPI VQAASIAAWA DEAHVIDNRA
QYREKFAQVT PMLAEVMDVA LPDAGFYLWA AVPDAFKGSD TAFSRELLAL YNVVVLPGSY
LARDAQGCNP GAGRIRMALV AQTAECVEAA QRIVQFIQSK VH
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