| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1811 |
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| Symbol | |
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| ID | 4688663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1923532 |
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| End bp | 1924674 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834817 |
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| Product | twitching motility protein |
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| Protein accession | YP_982042 |
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| Protein GI | 121604713 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.148684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA TTCTGCGTTT GATGGTGGAC AAGAAAGCGT CTGACGTTTA CCTGTCCGCC
CACTCACCCG CCATCATCAA GATCAACGGG CAGGCCATTC CCATCAATGC GCAGATCCTG
CCAGCCGACG CGCCGCGCAG CCTGCTGGCC GAAATGGTGC CGCCAGAGCG GATCGAGGAA
CTCGATGAAA TCGGCGAACT CAACATGGGG CTGGCGGTCG AGGGCCTGGG CAACTTTCGC
ATCAGCGGCT TTCGCCAGCG CAGCACCTAT GCAGCGGTGA TTCGCTACAT TCCGAACAAG
ATTCCGGCGC TGGCCAGCCT GAACGTGCCG CCGCTGCTGG GCGAGCTGAT CATGGAAAAG
CGCGGCCTGC TGCTGATGGT GGGCGCCACC GGCGCCGGAA AAACCACTAC GCTGGCGTCG
ATGATCGACA AGCGCAATGA AACCGTGACC GGCCACATCC TGACGATTGA AGACCCGATT
GAGTTTTTCT TCACCAACAA GAAGTCGGTC GTCAACCAGC GCGAGGTCGG CAGCGACACC
CAGTCGCTGC AGGTGGCGCT GAAGAACGCG CTGCGCCAGG CGCCCGACGT GATCATGATC
GGCGAGATCC GCGACCGCGA AACCATGTCG GCGGCGATTG CCTACGCGCA GTCGGGCCAC
CTGTGCCTGG CCACCATGCA CGCCAACAAC AGCTACCAGG CGCTCAACCG CATCCTGAGC
TTTTACCCGG TCGAAGTGCG CCCGACCCTG CTGGGCGACC TGGCGGCCGC CCTGAAGGCC
GTCATCTCGC AGCGCCTGCT GCGCACGCAA ACCAACACCC GCGTGCCGGC GGTGGAAGTC
ATGCTCAACA CCAAGCTGAT TTCCGATCTG ATCGAGCGCG GTGATTTTTC GGGCGTCAAG
GAAGCGATGG AAAAATCCAT GGCCGAAGGC TCGCAGACCT TCGAGCAGAA CATCGCCAAA
ATGATCACCG AAGGCACCGT GACGCGCAAG GAAGGCCTGG CGCATGCCGA TTCGCCCACC
AACCTGATGT GGCGGCTGGA AAATGACTTT TCAGCAGCGG CCCAGGCCAA GGCGGAGGAA
ACCCATTTCG ACCCGGATGA CGAGCCGTCA TTCACCGAAA TCACGCTGGA CGTCAGGCAC
TGA
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| Protein sequence | MERILRLMVD KKASDVYLSA HSPAIIKING QAIPINAQIL PADAPRSLLA EMVPPERIEE
LDEIGELNMG LAVEGLGNFR ISGFRQRSTY AAVIRYIPNK IPALASLNVP PLLGELIMEK
RGLLLMVGAT GAGKTTTLAS MIDKRNETVT GHILTIEDPI EFFFTNKKSV VNQREVGSDT
QSLQVALKNA LRQAPDVIMI GEIRDRETMS AAIAYAQSGH LCLATMHANN SYQALNRILS
FYPVEVRPTL LGDLAAALKA VISQRLLRTQ TNTRVPAVEV MLNTKLISDL IERGDFSGVK
EAMEKSMAEG SQTFEQNIAK MITEGTVTRK EGLAHADSPT NLMWRLENDF SAAAQAKAEE
THFDPDDEPS FTEITLDVRH
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