Gene Pnap_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1805 
Symbol 
ID4688308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1917738 
End bp1918247 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID639834811 
ProductISSod10, transposase OrfB 
Protein accessionYP_982036 
Protein GI121604707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.760209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG GCCAGCGCGG CACGCAAACG CGCCTGTGGG CGCGCAAGGG AACGCGGCCC 
CGGGTGGTGC GCCAGCAGCA GTCCGAATCG GCATACATCT TTGGCGCCGT CTGTGCGCAG
CGCGATACCG CTGTTGGCCT GATCCTGCCG CAGGCCAATA CCGAGGCGAT GGCCCTACAC
CTGCAGGCCA TCAGCGAGGC CGTTCCTGCG GAGCGCCACG CGGTGCTGGT GCTCGATCGT
GCAGGGTGGC ATACCACCGC CAAACTGCCC CAGTTCTCCA ATCTCTCATT GCTGCCGCTG
CCCGCGGGTT CACCCGAACT CAACCCGGCC GAGCAGGTGT GGCAGCAACT GCGCGACCGG
CACCTGGCCA ACCGCTGCTA TGACGGGTAT GAGCAGATTG TGGATGCCTG CTGCGACGCC
TGGAATGCCT TCACGCAAAT CCCTGGTGCC ATCCGCTCTT TGTGCTCCCG CAACTGGACA
GTGCTGCCTT CAGCTTCGGT TATCTCATGA
 
Protein sequence
MRIGQRGTQT RLWARKGTRP RVVRQQQSES AYIFGAVCAQ RDTAVGLILP QANTEAMALH 
LQAISEAVPA ERHAVLVLDR AGWHTTAKLP QFSNLSLLPL PAGSPELNPA EQVWQQLRDR
HLANRCYDGY EQIVDACCDA WNAFTQIPGA IRSLCSRNWT VLPSASVIS