Gene Pnap_1804 details

Gene Information

• Locus tag: Pnap_1804
• Symbol: prpE
• ID: 4687608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas naphthalenivorans CJ2
• Kingdom: Bacteria
• Replicon accession: NC_008781
• Strand: +
• Start bp: 1915717
• End bp: 1917630
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639834810
• Product: propionyl-CoA synthetase
• Protein accession: YP_982035
• Protein GI: 121604706
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.540364
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAGCT ATGCAGACTT CTACCGCCAG TCCATCGACC AGCCCGACGC CTTCTGGGCC 
GAGCAGGCCA GCCTGATCGA GTGGCACAAG CCCTTTGACC GCGTCTGCAA CTACGACAAT 
CCGCCGTTTG TCAAATGGTA CGAAGGCGGC CAGACCAACC TGTGCCACAA CGCCGTGGAC 
CGGCATTTGG CGGACCGGGC CGGCCAGGCC GCGCTGATTG CCGTCTCCAG CGAAACCGGC 
TTGGAGAAAA CCTACACCTT CCAGGATCTG CACGGCGAAG TGCAGCGCAT GGCCGCCAGC 
CTGAAGGCGC TCGGCGTCGA GCAGGGCGAC CGCGTGCTGA TCTACATGCC GATGATTGCC 
GAAGCTGCCT TTGCGATGCT GGCCTGCGCC CGCATCGGCG CGGTGCATTG CGTGGTGTTT 
GGCGGATTTG CCAGCGGCTC GCTGGCTTCG CGCATTGAAG ATGCGGCGCC CAAGGTCATC 
GTCAGCTCCG ATGGCGGCTC GCGCGGCGGC AAGGCGCTGC CCTACAAGCC GCTGCTCGAC 
GAGGCGATCC GCCTGTCCAG CCACAAGCCA AGCGCCGTGC TGCTGGCCGA CCGGGGCCTG 
GCGGCCATGG AACTGGTGGC CGGGCGCGAC CACCTCTGGA ACGAGTTGCG CGAACAGCAT 
TTCGATGCAC AGGTGCCGTG CGAATGGCTG GACTCGACCG CCATCAGCTA CACCATCTAC 
ACCAGCGGAA CCACCGGCAA GCCCAAGGGC GTGCAGCGCG ACACGGCCGG CTACACCGTA 
GCCTTGGCCG CGAGCATGAA GCACATCTTC GACGGCCATG CCGGCGAAAC CTTCTTCTCG 
ACCAGCGACA TCGGCTGGGT CGTCGGCCAC AGCTACATCG TCTATGGCCC GCTGATTGCC 
GGCATGGCGA CCATCATGTA CGAAGGCCTG CCGACGCAGG GTATGGACAA AAAGCCCAAC 
GGCGGCATCT GGTGGGAACT GGTCGAGAAA TACAAGGTCA CGGTCATGTT CAGCGCGCCA 
ACCGCCGTGC GCGTCTTGAA AAAGCAGGAC CCCGCCTTGC TGACGAAATA CGATTTGTCG 
AGCCTGCGCG CGCTGTTCCT GGCCGGCGAG CCGCTCGATG AGCCGACCGC CCGCTGGATC 
AGCGAAGGCC TCAATGTGCC GATCATCGAC AACTACTGGC AGACCGAAAG CGGCTGGCCG 
ATTCTGACGA TTGCCAACGG CGTCGAGTCC AAGCCCAGCA AGTTCGGCAG CCCCGGCATT 
CCGATGTACG GCTACAACGT CAAGCTGCTG CACGAATCAA CCGGCGAAGA ACTGACCGTT 
CCGGGTGAAA AAGGCGTGGT GGTCATTGAA GGACCGACGC CTCCGGGCTT CATGCAGACC 
ATCTGGCAGG ATGACGCTCG CTTCGTCAAC ACCTATTGGA AGAGCATTCC CGGCAGGCTG 
GTGTACAGCA CCTTCGACTG GGGAATCCGC GACGCCGACG GCTACTTCTT CATCCTGGGC 
CGCACCGACG ACGTGATCAA CGTGGCGGGC CACCGGCTCG GAACGCGCGA GATCGAGGAA 
AGCATTTCCG GCCATTCGCA GGTCTCGGAA GTGGCCGTGG TCGGCGTGGC CGACGGCCTC 
AAGGGCCAGG TCGCGATGGC CTTTGCGGTG CTCAAGGATT CCAGCGTGCT GAACGACGCC 
GCAGCCTGCG CCAGGCTCGA AGCCGAAATC ATGAAGCGCG TGGACAACGA CCTGGGCGCG 
GTGGCCCGGC CGGCCCGCGT CCGCTTTGTG ACGGTCTTGC CCAAGACGCG CAGCGGCAAG 
CTGCTGCGCA GGGCCATCCA GGCGGTGTGC GAAGGCCGCG ATGCCGGTGA CCTGACGACG 
ATGGACGACC CGGCCGCGCT GCAGCAGATC AGGGACCGGG TGGAAACCGT ATAG 

 

Protein sequence

MTSYADFYRQ SIDQPDAFWA EQASLIEWHK PFDRVCNYDN PPFVKWYEGG QTNLCHNAVD 
RHLADRAGQA ALIAVSSETG LEKTYTFQDL HGEVQRMAAS LKALGVEQGD RVLIYMPMIA 
EAAFAMLACA RIGAVHCVVF GGFASGSLAS RIEDAAPKVI VSSDGGSRGG KALPYKPLLD 
EAIRLSSHKP SAVLLADRGL AAMELVAGRD HLWNELREQH FDAQVPCEWL DSTAISYTIY 
TSGTTGKPKG VQRDTAGYTV ALAASMKHIF DGHAGETFFS TSDIGWVVGH SYIVYGPLIA 
GMATIMYEGL PTQGMDKKPN GGIWWELVEK YKVTVMFSAP TAVRVLKKQD PALLTKYDLS 
SLRALFLAGE PLDEPTARWI SEGLNVPIID NYWQTESGWP ILTIANGVES KPSKFGSPGI 
PMYGYNVKLL HESTGEELTV PGEKGVVVIE GPTPPGFMQT IWQDDARFVN TYWKSIPGRL 
VYSTFDWGIR DADGYFFILG RTDDVINVAG HRLGTREIEE SISGHSQVSE VAVVGVADGL 
KGQVAMAFAV LKDSSVLNDA AACARLEAEI MKRVDNDLGA VARPARVRFV TVLPKTRSGK 
LLRRAIQAVC EGRDAGDLTT MDDPAALQQI RDRVETV