Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1803 |
Symbol | |
ID | 4686254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1913691 |
End bp | 1915421 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834809 |
Product | ABC transporter |
Protein accession | YP_982034 |
Protein GI | 121604705 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.550427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG CAGAACAACC CGGATTCAAC GCCCGCCTGT GGCGACGCTT CGCCACGATT GCGCGGCCTT ACTGGTTCTC GGATGAGCGC TGGCGTGCCC GTGGCATGCT GGTGCTGCTG GTCTTTCTGC TGCTGGGGCA GACCGCCTTC AACGTGCTGT TCAACCAGGA AACCGGCGAA TTCACCTCGG CCCTGGCGGC GCGCGATGCC GACCGTTTCT GGGCCTCGAT CTGGCGCTAC ACGGCGATTC TCGTGGCGGC TGTGCCGATT TACGCGCTGT ATTACTACGT GCGCGACACG CTCGGGCTGC GCTGGCGGCG CTGGCTGACG GACCGTTTTT TGGCGCGCTA TTTTCATCAG CGCGCCTATT ACCGGCTCGG CACGGAGGCC GGCATCGACA ACCCCGACCA GCGCATTTCC GAAGACATCA ACTCCTTCAC CCAGCAGTCG CTGTATTTCT CGATGATCGT GCTGGGCTCG GTGCTCCAAC TGGTCGCCTT TTCGGCCGTG CTGTGGTCGA TCTCGCAGGG TCTGGTTTTT TTCCTGATCG GCTATGCGGT GTTCAGCACC GTCTTCACGG GCGCGGTGTT CGGCAAGCGG CTGATCGGGC TGAACTTTCG CCAGCTGCAG CGCGAGGCCG ACTTTCGCTT CAGCCTGGTG CGGGTGCGCG AGCATGCCGA GCCGATTGCC TTTCACGATG GCGAGGCGCG CGAAATGTCG GCGCTGCAAC GCATCTTCGC GCTGGCCTAC GCCAACTACC AGCAGGTGCT GCGCTGGCAG TTCGGGCTCA ACCTGTTCCA GTACGCGCAT GCGTTCCTGA CCATCGTTCT GCCCACGGTG ATCATTGCCG GTGATGTGCT GTCGGGGCGC CTGGAGGTCG GCCGGGCGAT ACAGGCCGCG GGCGCCTTTG CCGCCATCCT GAGCGCGCTC ACGGTAATCG TCGAACATTT CGAAGGCCTG AGCCGCTTTT CAGCCGGCGT CGAGCGGCTG CATGCCTTTT CGCAAGCCCT GGATGCCGAA GCCGGCACGC CCGGCGGCGC TGCCGATGAT GCCTTCCAGA AAATTCATAC GCTGCATGGT TTTGAGTTAA GCCTTGAACG GCTGACGATA CTCACGCCCG GGCGGGAGCA TCTGCTGCTT CAAGAGGTCA CGCTAGCCGT CAACCCCGGC CAGGGGCTGC TGATCGTCGG ACCCAGCGGC ACAGGCAAGA GTTCGCTGCT GCGGGTGATT GCCGGGCTGT GGACCACCGG CTCGGGCGAG GTGACACGGC CGGCCGGATC GGACATGCTG TTCATGCCCC AGCAGCCCTA CCTGCCGCTG GGCGACCTGC GCTGCCAGCT GACCTACCCG CACACCGAGC GCGACATCTC GGACGAAGAG CTGCTGCAGT GGCTGGCGCA GGTAAACCTG CCGGCGCTGG CCGAGCGCTT CGGCGGCCTG GGTGCCGAGC TGGACTGGCA GCGCGTGCTG TCAGTCGGCG AGCAGCAGCG GCTGGCCTTC GCCCGGGCCC TGCTCGCCAA GCCGCGCTAC CTGCTGCTTG ACGAGGCCAC CAGCGCGCTC GATGCGGCCA ATGAGGAGCT TTTGTACGGC CAGTTGGCCG GCCTGTCGAT CACCCCGGTC AGCATCAGCC ACCACGCGGC GGTCCTGAAA CACCACGCCT GGGTGCTGGA GCTGCCCGGG GATGGCAGCT GGACGCTGCA TGCGGCGAAG AGCTACCGCT GGGGATCCTG A
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Protein sequence | MSAAEQPGFN ARLWRRFATI ARPYWFSDER WRARGMLVLL VFLLLGQTAF NVLFNQETGE FTSALAARDA DRFWASIWRY TAILVAAVPI YALYYYVRDT LGLRWRRWLT DRFLARYFHQ RAYYRLGTEA GIDNPDQRIS EDINSFTQQS LYFSMIVLGS VLQLVAFSAV LWSISQGLVF FLIGYAVFST VFTGAVFGKR LIGLNFRQLQ READFRFSLV RVREHAEPIA FHDGEAREMS ALQRIFALAY ANYQQVLRWQ FGLNLFQYAH AFLTIVLPTV IIAGDVLSGR LEVGRAIQAA GAFAAILSAL TVIVEHFEGL SRFSAGVERL HAFSQALDAE AGTPGGAADD AFQKIHTLHG FELSLERLTI LTPGREHLLL QEVTLAVNPG QGLLIVGPSG TGKSSLLRVI AGLWTTGSGE VTRPAGSDML FMPQQPYLPL GDLRCQLTYP HTERDISDEE LLQWLAQVNL PALAERFGGL GAELDWQRVL SVGEQQRLAF ARALLAKPRY LLLDEATSAL DAANEELLYG QLAGLSITPV SISHHAAVLK HHAWVLELPG DGSWTLHAAK SYRWGS
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