Gene Pnap_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1802 
Symbol 
ID4686528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1913168 
End bp1913593 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID639834808 
Producthypothetical protein 
Protein accessionYP_982033 
Protein GI121604704 
COG category[S] Function unknown 
COG ID[COG5579] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.544054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC CTCATCATCT TCAGCGTTTT GTCCTGGCGC AAGACCCGAT TTATCCGCAG 
GTCTGCGCCG AGCTGGCGGC CGGCGCCAAG GCCAGCCACT GGATGTGGTT TGTCTTTCCA
CAACTGAAGG CGCTGGGCCG CAGCGCCACC GCGCTGTTTT TCGGCATCGC ATCCCGGGAC
GAGGCACTGG CCTACTGGCA GCATCCCGTG CTCGGACCGA GGCTCAAGGC GTGCGCTGAG
CTCGTTTTGG CTGTCCAAGG CAAGACGGCG CTGCAGATTT TTCACTCGCC GGACGACCTC
AAGTTCCGCT CGTCAATGAC GCTGTTTGCG CAGGTGGCGC CACAAGAACC GGTCTTTGAC
CGGGCACTGG ACAAATACTT CGGCGGAAAA GGCGATGCCA GGACGCTTGA GCTGCTGGAG
GTTTAA
 
Protein sequence
MNDPHHLQRF VLAQDPIYPQ VCAELAAGAK ASHWMWFVFP QLKALGRSAT ALFFGIASRD 
EALAYWQHPV LGPRLKACAE LVLAVQGKTA LQIFHSPDDL KFRSSMTLFA QVAPQEPVFD
RALDKYFGGK GDARTLELLE V