| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1789 |
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| Symbol | |
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| ID | 4687363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1903901 |
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| End bp | 1904704 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834795 |
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| Product | ABC-type transport system ipermease component |
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| Protein accession | YP_982020 |
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| Protein GI | 121604691 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.047158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCAT CCGCTAGCTG GCACCGCCGT CTGACACGAA CAGGTCAGGC TGCGCAGCAG
TGGTTCATTG AATGGTGGCA ACTGATCCAC CTGGGCGCGG TCATCCTGGT GCTGACACTC
TCGCCATCGA GCTACCGGCG TGAAAACCGC CTGGTGCTGG GCCGGCATAT CTATATGAGC
ACGGCGCCCA TTTTGCTGGG CTTTTCCCTG CTGTGCGCGC TGGTGACCGT GGTCATCACG
CGCATCGTGA TGGTGACCGC GCTCAGCTAT GGCCTGTCGC AGTATGCGCT GCAGGTCGTG
ATCCGGGTGC TGGTGCTGGA GCTGATTCCG CTGTCCGCCG CGCTGTTCGT GGCGCTGCGC
TGCACGATTC CCGATGGCGC GGAACTCACC GCCATGCAGG CCAGCGGCGA GCTGGACGAG
ATGCGCAGGC AGGGCGTGGA GCCGATACGC CGCGAGGTGC TGCCGCGCGT GGTGGCCGGC
ATGTTTTCGG GCATCACGCT GGCCGCGCTC AGTTGCGTGG TGGCGGTGAT GGTGGCGTAT
GTCGCGGTCT ATGGATTTGC CGTGTCGGGG CTGGCGGTCT ATACGCGGCT GTTCGGGCAG
GTGTTCACGC CGGCCGTCAC GCTGATCTTT GTGCTGAAAA CCGTGTTTTT TTGCCTGGCC
GTGTCGTTGA TACCGATGGC CTCGGCGCTG TACGGAATGC GCGGCGCCAA CATTCGCAGC
AGCGCCGAAA TGCGCGGCCT GGTCCGCATG TTCGCGGTGT TGCTGCTGGT TGAAGTGGCT
TCGCTGGTCG GCAACTATTA TTGA
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| Protein sequence | MTPSASWHRR LTRTGQAAQQ WFIEWWQLIH LGAVILVLTL SPSSYRRENR LVLGRHIYMS
TAPILLGFSL LCALVTVVIT RIVMVTALSY GLSQYALQVV IRVLVLELIP LSAALFVALR
CTIPDGAELT AMQASGELDE MRRQGVEPIR REVLPRVVAG MFSGITLAAL SCVVAVMVAY
VAVYGFAVSG LAVYTRLFGQ VFTPAVTLIF VLKTVFFCLA VSLIPMASAL YGMRGANIRS
SAEMRGLVRM FAVLLLVEVA SLVGNYY
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