| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1784 |
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| Symbol | |
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| ID | 4690151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1898673 |
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| End bp | 1900538 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834790 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_982015 |
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| Protein GI | 121604686 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00978401 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCCT CCACAAACCT CATCGACATC AAGGTGCCTG ACATTGGCGA CTTTGACGAA
GTGTCCGTCA TCGAAGTGCT GGTCAAGCCC GGCGACACCA TCAAGGCCGA GCAGAGCCTG
ATCACCGTGG AAAGCGACAA GGCGTCCATG GAAATTCCGT CGTCGCAAGG CGGCGTGGTC
AAGGAGATCA AGGTCCAGCT CGGCGACAAG GTCAAGCAGG GCTCGGTCGT GCTGACGCTG
GAAGTCGCTG GCGCGGCGGC TTCGGCCCCC GTTGAAGCAC CAAAACCGGC TTCCGCGCAG
GCTGCACCTG CACCAGCCGC TCCTGAAAAA GTAGCGCCTG TTGCAACAAC GCCAGCGCCA
GCCGCCGCCA GCTTTGGCGG CACGGCCGAC CTGGATTGCG ACCTCCTGGT GCTGGGCGCC
GGCCCCGGCG GCTATTCGGC GGCCTTTCGA GCGGCTGACC TGGGCCTCAA GGTCGTGCTG
GTCGAGCGTT ACGCCTCGCT GGGCGGCGTC TGCCTGAACG TCGGCTGCAT CCCGTCCAAG
GCGCTGCTGC ATGTGGCTGC CGTGATGGAC GAGGTCAGCC ACATGGCCGC GCTCGGCGTG
GACTTCGGCG CGCCCAGCGT CAACATCGAC AAGCTGCGCG GCCACAAGGA AAAGGTCGTG
AACAAGCTGA CCGGCGGCCT GGCCGCGATG GCCAAGATGC GCAAGGTCAC CGTGGTGCGC
GGCTACGGCG CTTTTGTCGG CGCCAACCAC CTCGAAGTCG AGGAAACCAG CGGCACGTCG
CAGGACAAGA CCGGCAAGAA GCAGACCATT GCCTTCAAGA ACTGCATCAT CGCCGCCGGC
TCGCAAGCGA TGCGCCTGCC GTTCATGCCC GACGATCCGC GCGTGGTGGA CTCCACCGGC
GCGCTGGACC TCAAGAGTGT GCCCAAGCGC ATGCTGATCC TGGGCGGCGG CATCATCGGC
CTGGAAATGG GCACCGTGTA CAGCACGCTG GGCGCGCGCC TGGACGTGGT GGAAATGCTC
GACGGCCTGA TGCAGGGCGC CGACCGCGAC CTGGTCAAGG TCTGGCAGAA GATGAATGCG
CCGCGCTTTG ACAACATCAT GCTCAAGACC AAGACCGTGG GCGCCAAGGC CACGCCGGCC
GGCATTGAAG TGACGTTCGA AAGCGCCGAG CCGGGCGGCA CCGCGCCCGC GCCGCAGACC
TACGACCTGG TGCTGCAGGC CGTGGGCCGC AGCCCCAACG GCAAGAAGAT CGCCGCTGAC
AAGGCCGGCG TGAGCGTGAC GGACCGCGGC TTCATCCCCG TGGACATTCA GATGCGTACC
AACGTGCGGC ACATCTTCGC CATCGGCGAC ATCGTCGGCC AGCCGATGCT GGCGCACAAG
GCCGTGCATG AAGCGCATGT GGCCGCCGAA GTGATTGCCG GCGAACTGCT GGGCAACAAG
GAACTGGCCA GCGCCGCCTT CAATGCCCGG GTGATTCCGA GCGTCGCCTA CACCGACCCC
GAAGTGGCAT GGGTCGGCCT GACCGAAGAC CAGGCCAAGG CGCAGGGCAT CAAGGTCAAG
AAGGGCCTGT TCCCGTGGAC CGCCTCCGGC CGCGCAATTG CCAACGGCCG CGACGAAGGC
TTCACCAAGC TGCTGTTCGA CGATTCACCG GAAGCGCACG GCCACGGCAA GATCCTGGGC
GGCGGCATGG TCGGCACGCA CGCGGGCGAC ATGATCGGCG AGATCGCGCT GGCGATTGAA
ATGGGCGCGG ATGCGGTCGA TATCGGCAAG ACGATTCACC CGCACCCGAC GCTGGGCGAG
AGCATCGGCA TGGCGGCCGA AGTGGCGCAT GGCAGCTGCA CGGACTTGCC GCCTGCGCGC
AAGTAA
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| Protein sequence | MSASTNLIDI KVPDIGDFDE VSVIEVLVKP GDTIKAEQSL ITVESDKASM EIPSSQGGVV
KEIKVQLGDK VKQGSVVLTL EVAGAAASAP VEAPKPASAQ AAPAPAAPEK VAPVATTPAP
AAASFGGTAD LDCDLLVLGA GPGGYSAAFR AADLGLKVVL VERYASLGGV CLNVGCIPSK
ALLHVAAVMD EVSHMAALGV DFGAPSVNID KLRGHKEKVV NKLTGGLAAM AKMRKVTVVR
GYGAFVGANH LEVEETSGTS QDKTGKKQTI AFKNCIIAAG SQAMRLPFMP DDPRVVDSTG
ALDLKSVPKR MLILGGGIIG LEMGTVYSTL GARLDVVEML DGLMQGADRD LVKVWQKMNA
PRFDNIMLKT KTVGAKATPA GIEVTFESAE PGGTAPAPQT YDLVLQAVGR SPNGKKIAAD
KAGVSVTDRG FIPVDIQMRT NVRHIFAIGD IVGQPMLAHK AVHEAHVAAE VIAGELLGNK
ELASAAFNAR VIPSVAYTDP EVAWVGLTED QAKAQGIKVK KGLFPWTASG RAIANGRDEG
FTKLLFDDSP EAHGHGKILG GGMVGTHAGD MIGEIALAIE MGADAVDIGK TIHPHPTLGE
SIGMAAEVAH GSCTDLPPAR K
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