Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1781 |
Symbol | aceE |
ID | 4687011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1893611 |
End bp | 1896340 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639834787 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_982012 |
Protein GI | 121604683 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000127285 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000322845 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCAGCCA ATCCAGACGA AAACCAACAA GCCGGTATCC CCAATGCGGG TTCCAGCAAT ACGCAAGACA ACGACACGCA GGAGACGCGC GAGTGGATGG ATGCGCTGTC CGCGGTCATT GAAAGTGAAG GGCCTGAACG CGCCCACTTC CTGCTTGAGC AACTGCTCGA ACATGCGCGC CAGAAGAGCA TCGACATGCC CTTTTCGGCC AACACGGGTT ATGTCAACTC GATTGAAACC GACCAGGAAG AGCGCTCACC CGGCAACCTG CTGATCGAGC AGCGGCTGCG CGCCTACATG CGCTGGAACG CCATGATCAT GGTGGTCAAG GCCAACCGCC TGCACCCGGC CGATGGCGGC GATTTGGGCG GGCACATCGG CTCGTTTGCC TCGCTGGCCA GCCTGTTTGG CGCCGGCTTC AACCATTTCT GGCACGCTGA GAGCGAAAAC CACGGCGGCG ACTGCCTCTA CATCCAGGGC CATGTGTCGC CCGGCGTGTA TGCCCGTGCC TACCTCGAAG GCCGCCTGAC GGAAGAGCAG CTGCTCAACT TCCGCCAGGA AGTCGATGGC AAGGGCTTGT CGAGCTACCC GCATCCCAAG CTGATGCCCA ATTTCTGGCA GTTCCCCACC GTCTCCATGG GCCTTGGCCC GCTGATGGCG ATTTACCAGG CCCGTTTCCT GAAATACCTG CATGCGCGCG GCATTGCCAA CACCGAAAAC CGCAAGGTCT GGGTGTTCTG CGGCGACGGC GAGATGGACG AGGTCGAATC GCTGGGCGCC ATCGGCCTGG CGGCGCGTGA AAACCTCGAC AACCTGGTGT TCGTCATCAA CTGCAACCTG CAGCGCCTCG ACGGCCCGGT GCGCGGCAAC GGCAAGATCA TCCAGGAACT CGAAGGCGAA TTCCGCGGCG CCGGCTGGAA CGTCATCAAG CTGATCTGGG GCAGCAGCTG GGATCCGCTG CTGGCGCGCG ACAAGGACGG CGCGCTGCGC AAGATCATGA TGGAGTGCAA CGACGGCGAT TACCAGTCGT TCAAGGCCAA CGACGGCGCC TATGTGCGCA AGCATTTCTT CGGCCGCGAC CCGCGCACGC TGGAAATGGT CGCCAACATG AGCGATGACG ACATCTGGAA GCTCACCCGT GGCGGCCACG ATTCGCAAAA GGTCTATGCC GCCTTCCATT CGGCCGTCAA CCACACCGGC CAGCCGAGCG TGCTCCTGAT CAAGACCGTC AAGGGTTTTG GCATGGGCAA GATCGGGGAG GGCAAGAACA ATGTCCACCA GACCAAGAAG CTCGGCGACG AAGACATCAA GGCCTTCCGC GACCGCTTCA ACATCCCCAT TCCCGACAGC CAGCTGGCCG AACTGCCGTT CTACAAGCCG GCCGACGACA CGCCTGAAAT GCAGTACCTG CACGAGCGCC GCAAGGCGCT GGGCGGCTAC CTGCCGCACC GCCGCACCAA GGCGGACGAG AGCTTCACCG TGCCGGCCCT GGAAACTTTC AAGGCGGTGA TGGACCCCAC GCCAGAAGGC CGCGAAATCT CGACCACCCA GGCCTATGTG CGCTTCTTGA CGCAACTGCT GCGCGACCAG GCGCTCGGTC CGCGCGTCGT GCCCATCCTG GTCGATGAAG CCCGCACTTT CGGCATGGAA GGCCTGTTCC GCCAGATCGG CATCTACAAC CCTGCCGGCC AGCAATACAC CCCGGTCGAT AAAGACCAGG TGATGTATTA CAAGGAAGAC AAGAAGGGCC AGATCCTGCA GGAAGGCATC AACGAAGCCG GCGGCATGAG CAGCTGGATT GCGGCGGCCA CTTCGTACAG CACCAACAAC CGCATCATGG TGCCGTTCTA TGTGTATTAC TCGATGTTCG GCTTCCAGCG CATCGGCGAC CTGGCCTGGG CGGCGGGCGA CATGCAGGCG CGCGGCTTTC TGCTCGGCGG CACCTCGGGG CGCACCACGC TCAACGGCGA AGGCCTGCAG CACGAAGACG GCCACAGCCA CATCCTGGCC GGCACGATTC CGAACTGCAT CAGCTACGAC CCGACCTTTG CGCATGAAGT CGGCGTGATC CTGCACCACG GCTTGAAGCG CATGGTTGAA AAGCAGGAAA ACGTGTATTT CTACATCACG CTGCTGAACG AGAACTACGC CATGCCCGGC CTCAAAGCCG GCACCGAAGA GCAGATCATC AAAGGCATGT ACCTGTGCAA CGAAGGCCCC AAGCTGGCGC CCACCGTGCA ATTGCTGGGC TCGGGCACCA TCCTGCGCGA GTCGATTGCC GCGCAGGAGC TGTTAGAGAA AGAGTGGGGT GTGTCGGCCA ACGTGTGGAG TTGCCCAAGC TTCAACGAAC TGGCGCGCGA CGGCCAGAGC GCCGAGCGCT GGAACCTGCT GCATCCGCTG GAGACGCCGC GCGTTTCCTT TGTAGCCGAA CAACTTGAAG CGTTTGCCGG TCCGGTGGTC GCCTCGACCG ACTACATGAA GGCCTATGCC GAACAGATCC GCTCCTATAT TCCCAAGGGC CGTACCTACA AGGTGCTGGG CACCGACGGT TTTGGCCGCA GCGATTTCCG CAGCAAGCTG CGCGAGCACT TCGAGATCAA CCGCCACTAC ATCGTCGTGG CGGCGCTCAA GGCGCTCAGC GAAGAGGGCA CGGTGCCGGT CGCCAAGGTG GCCGAAGCCA TCCAGAAGTA CGGCATCAAC GCCGACAAGA TCAATCCGCT TTACGCTTGA
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Protein sequence | MAANPDENQQ AGIPNAGSSN TQDNDTQETR EWMDALSAVI ESEGPERAHF LLEQLLEHAR QKSIDMPFSA NTGYVNSIET DQEERSPGNL LIEQRLRAYM RWNAMIMVVK ANRLHPADGG DLGGHIGSFA SLASLFGAGF NHFWHAESEN HGGDCLYIQG HVSPGVYARA YLEGRLTEEQ LLNFRQEVDG KGLSSYPHPK LMPNFWQFPT VSMGLGPLMA IYQARFLKYL HARGIANTEN RKVWVFCGDG EMDEVESLGA IGLAARENLD NLVFVINCNL QRLDGPVRGN GKIIQELEGE FRGAGWNVIK LIWGSSWDPL LARDKDGALR KIMMECNDGD YQSFKANDGA YVRKHFFGRD PRTLEMVANM SDDDIWKLTR GGHDSQKVYA AFHSAVNHTG QPSVLLIKTV KGFGMGKIGE GKNNVHQTKK LGDEDIKAFR DRFNIPIPDS QLAELPFYKP ADDTPEMQYL HERRKALGGY LPHRRTKADE SFTVPALETF KAVMDPTPEG REISTTQAYV RFLTQLLRDQ ALGPRVVPIL VDEARTFGME GLFRQIGIYN PAGQQYTPVD KDQVMYYKED KKGQILQEGI NEAGGMSSWI AAATSYSTNN RIMVPFYVYY SMFGFQRIGD LAWAAGDMQA RGFLLGGTSG RTTLNGEGLQ HEDGHSHILA GTIPNCISYD PTFAHEVGVI LHHGLKRMVE KQENVYFYIT LLNENYAMPG LKAGTEEQII KGMYLCNEGP KLAPTVQLLG SGTILRESIA AQELLEKEWG VSANVWSCPS FNELARDGQS AERWNLLHPL ETPRVSFVAE QLEAFAGPVV ASTDYMKAYA EQIRSYIPKG RTYKVLGTDG FGRSDFRSKL REHFEINRHY IVVAALKALS EEGTVPVAKV AEAIQKYGIN ADKINPLYA
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