Gene Pnap_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1778 
Symbol 
ID4686090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1889136 
End bp1889981 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID639834784 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_982009 
Protein GI121604680 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0122285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC AACTCATTGA TGGCAACGCC CTTTCCCGGC AACTGCGAAC CGAAGTCGCC 
CAACGCGCTG CGCTTCTGCG CGCGCGCGGC ATCACCCCCG GCCTGGCCGT GGTCCTGGTC
GGCGACAACC CGGCCAGCCA GGTGTATGTG CGCAACAAGG TCAAGGCTTG CGAAGACAAC
GGCCTGCATT CGGTGCTGGA GCGCTACCCG GCCGAGATGA GCGAAGCCGA TCTGCTGGCC
CGCGTAGAAG CCCTGAACAA CGACCCGGCG ATTCACGGCA TCCTGGTGCA ACTGCCGCTG
CCGGCCCATA TCGATGCGCA AAAGGTCATC GAGGCAATTT CACCGGCCAA GGACGTGGAC
GGTTTCCACG TCGGCAGCGC CGGCGCGCTG ATGGTCGGCC AGCCCGGCTT CTGGCCCTGC
ACGCCTTATG GCTGCATGAA GATGCTGGAG AGCATCGGCT ACGACCTGCG CGGCAAGCAC
GCAGTGGTGA TCGGCCGCAG CAACATCGTC GGCAAGCCGA TGGCGCTGAT GCTGCTGCAG
AAAAACGCCA CCGTGACCAT CTGCCACAGC GCCACCGCCG ACCTCAAAGC CATGACGCTG
CAGGCCGACG TGATCGTCGC CGCCGTGGGC AAGCGCAACG TCTTGAGAGC CGACATGGTC
AAGCCCGGCG CGGTGGTGAT CGACGTCGGC ATGAACCGCA ACGAAGAAGG CAAGCTCTGC
GGCGATGTGG ACTTTGACGG CGTGAAAGAA GTCGCCGGCT ACATCACGCC GGTGCCCGGC
GGCGTCGGTC CGATGACCAT CACGATGCTG CTGGTCAATA CGCTGGAAGC GGCTGAACGC
GGCTGA
 
Protein sequence
MTAQLIDGNA LSRQLRTEVA QRAALLRARG ITPGLAVVLV GDNPASQVYV RNKVKACEDN 
GLHSVLERYP AEMSEADLLA RVEALNNDPA IHGILVQLPL PAHIDAQKVI EAISPAKDVD
GFHVGSAGAL MVGQPGFWPC TPYGCMKMLE SIGYDLRGKH AVVIGRSNIV GKPMALMLLQ
KNATVTICHS ATADLKAMTL QADVIVAAVG KRNVLRADMV KPGAVVIDVG MNRNEEGKLC
GDVDFDGVKE VAGYITPVPG GVGPMTITML LVNTLEAAER G