| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1775 |
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| Symbol | |
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| ID | 4689047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1884808 |
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| End bp | 1888050 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834781 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_982006 |
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| Protein GI | 121604677 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0145258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGC GCACAGACAT CAAATCGGTT CTCATCATTG GCGCCGGCCC GATCATCATC
GGCCAGGCCT GCGAATTTGA CTATTCCGGC GTTCAGGCCT GCAAGGCGCT GCGCGAGGAA
GGCTACAAGG TCATCCTGAT CAACAGCAAT CCGGCCACGA TCATGACCGA CCCGGCGACC
GCCGACGTGA CCTACATCGA GCCGATTACC TGGCAGACGG TGGAAAAGAT CATCGCCAAG
GAACGGCCGG ACGCGATTCT GCCGACCATG GGCGGCCAGA CCGCGCTCAA TTGCGCGCTT
GATCTGTGGC GCCACGGCGT GCTTGAAAAG TACAGCGTCG AGCTGATCGG CGCCAAGCCC
GAGGCCATCG ACAAGGCCGA GGACCGCCTG AAGTTCAAGG ACGCGATGAC CAAGATCGGC
CTGGGTTCGG CCCGCTCCGG CATCGCGCAC ACCATGGACG AAGCCTGGTC TGTGCAAAAA
ACGCTGGGTT TCCCAACCGT GATCCGCCCC AGCTTCACGC TGGGCGGCAC CGGTGGCGGC
ATTGCCTACA ACCCCGAAGA GTTCGAGGAA ATCTGCAAGC GCGGCCTGGA AGCCTCGCCG
ACCAGCGAAC TGCTGATTGA AGAATCGCTG CTCGGCTGGA AAGAGTACGA GATGGAAGTG
GTTCGCGACA CGGCGGACAA CTGCATCATC GTCTGCTCGA TTGAAAACCT CGACCCGATG
GGCGTGCACA CCGGCGACTC GATCACCGTA GCGCCGGCCC AGACGCTGTC CGACAAGGAA
TACCAGATTC TGCGCAATGC GAGCCTGGCG GTGCTGCGCG AAATCGGCGT CGATACCGGC
GGCTCCAACG TGCAGTTCTC CATCAACCCG GTCGATGGCC GCATGGTGGT GATCGAGATG
AATCCGCGCG TGTCGCGTTC CTCGGCGCTG GCTTCCAAGG CGACGGGTTT CCCGATTGCC
AAGGTTGCCG CCAAGCTGGC GGTGGGCTAC ACGCTCGACG AACTGCGCAA CGAGATCACC
GGCGGTGCCA CGCCGGCCAG CTTCGAGCCC AGCATCGACT ATGTGGTCAC CAAGATTCCG
CGCTTTGCGT TCGAGAAATT CCCGACCGCC GATTCGCGCC TGACGACGCA GATGAAGTCG
GTCGGCGAAG TCATGGCGAT GGGCCGGACC TTCCAGGAAT CGTTCCAGAA AGCGCTGCGC
GGGCTCGAAG TCGGCGTCGA TGGCATGAAC GAAAAGACCC AGGACCGCGA AGTGCTGGAA
AAGGAACTCG GCGCGCCGGG TCCGGACCGC ATCTGGTATG TGGGCGATGC GTTTGCCATG
GGCCTCTCCG TCGATGAAGT GTTTGCACTG ACCAAGATCG ACCGCTGGTT CCTGGTGCAG
ATCGAGCAGA TCGTCAAGAT CGAACTCGAA CTGGAAACCA CGTCGCTCGA CAAGATCGAC
GCTGCCACGC TGCGCGCGCT CAAGCAAAAA GGCTTTTCCG ACCGCCGCCT GGCGCGCCAG
TTCAAAACCA CCGACACCGC GATCCGTGAA AAGCGCATCG CGCTGGGCGT GCGCCCGGTC
TACAAGCGCG TGGACACCTG CGCCGCCGAG TTCGAGACCA ACACCGCCTA CCTGTACTCG
ACCTACGAGG CCGAGGGCAG CGAGTGCGAA GCCGCGCCTA CCGACAAGAA GAAGATCATG
GTGCTGGGCG GCGGTCCCAA CCGCATCGGC CAGGGCATCG AGTTCGACTA TTGCTGCGTT
CACGCCGCCA TGGCGATGCG AGAGGACGGC TACGAGACCA TCATGGTCAA CTGCAATCCC
GAGACGGTTT CGACCGACTA CGACACCAGC GACCGGCTGT ATTTCGAGCC GCTGACGCTC
GAAGACGTGC TGGAAATCGT TGACAAGGAA AAACCGTTCG GCGTGATCGT CCAGTACGGC
GGCCAGACGC CCTTGAAGCT CGCGCTGGAC CTCGAAGCCA ACGGCGTGCC GATCATCGGC
ACCTCGCCCG ACATGATCGA CGCCGCCGAA GACCGCGAGC GTTTCCAGAA GCTGCTGCAC
GCGCTGGAGC TGCGCCAGCC GCCCAACGCC ACCGCCCGCA CCGAGCCCGA AGCGCTCGAA
AAGGCGGCGG CGCTGGGTTA TCCGCTGGTG GTGCGCCCCA GCTACGTGCT GGGCGGGCGC
GCCATGGAAA TCGTCCATGA GCAGCGCGAC CTGGAGCGCT ACATGCGCGA AGCCGTCAAG
GTCAGCCATG ACTCGCCGGT GCTGCTCGAC CGCTTTTTGA ACGATGCCAT CGAATGCGAT
GTGGACTGCA TCCGCGATGC CGAAGGCAAG ACCTTCATTG GCGGCGTGAT GGAACACATC
GAGCAGGCCG GCGTTCACAG CGGCGACTCG GCCTGTTCGC TGCCGCCGTA TTCGCTGAGC
GCCGCGACGG TGACAGAGAT CAAGCGCCAG ACCGCCGCCA TGGCCGAAGC GCTGAATGTG
GTCGGGCTGA TGAATGTGCA GTTCGCGATC CAGAACATCG ACGGCCTGGA TGTCATCTAC
GTATTGGAAG TCAATCCGCG CGCATCGCGC ACCGTGCCTT TCGTCAGCAA GGCCACCGGC
ATCCAGCTGG CCAAGGTGGC CGCGCGCTGC ATGGTCGGAC AGTCGCTGGC GTCGCAAGGC
GTGGTCAACG AAGTCACGCC GCCTTATTTC AGCGTCAAGG AGGCGGTGTT CCCCTTCGTC
AAGTTCCCCG GCGTGGACAC GATTCTCGGC CCCGAGATGA AGTCCACCGG CGAGGTGATG
GGCGTCGGCA AGACCTTTGG CGAGGCGTTC GTGAAGTCGC AAATCGGTGC CGGCACCAGG
CTGCCGACCT CTGGCAAAGT CTTCCTGACG GTCAAGAACA ACGACAAGGC GCGCGCCGTG
GAAGTGGCGC GTGCGCTGGC CGAACTCAAG TTCGAGCTGG TGGCCACCAA GGGCACGGCA
GCAGCCATCA ACGCCGCCGG CATTGCCTGC GGCGTCGTCA ACAAGGTGAC CGAAGGCCGG
CCGCATGTGG TGGACATGAT CAAGAACAAC GGGATTGCGC TGGTCATCAA CACGGTCGAG
GAGCGCCGCA ATGCGATTGC CGATTCGCGG CAGATCCGCA CCTCGGCGTT GCTGGCCCGC
GTGACGACCT TCACCACCAT TGCCGGCGCC GAAGCGGCTG TCGAGGGCAT GAAGTACCTG
GACAACCTGA GCGTGTACTC GATTCAGGAA CTGCACGCCC AGCTGGCTGC GCAGGCAGCC
TGA
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| Protein sequence | MPKRTDIKSV LIIGAGPIII GQACEFDYSG VQACKALREE GYKVILINSN PATIMTDPAT
ADVTYIEPIT WQTVEKIIAK ERPDAILPTM GGQTALNCAL DLWRHGVLEK YSVELIGAKP
EAIDKAEDRL KFKDAMTKIG LGSARSGIAH TMDEAWSVQK TLGFPTVIRP SFTLGGTGGG
IAYNPEEFEE ICKRGLEASP TSELLIEESL LGWKEYEMEV VRDTADNCII VCSIENLDPM
GVHTGDSITV APAQTLSDKE YQILRNASLA VLREIGVDTG GSNVQFSINP VDGRMVVIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELRNEIT GGATPASFEP SIDYVVTKIP
RFAFEKFPTA DSRLTTQMKS VGEVMAMGRT FQESFQKALR GLEVGVDGMN EKTQDREVLE
KELGAPGPDR IWYVGDAFAM GLSVDEVFAL TKIDRWFLVQ IEQIVKIELE LETTSLDKID
AATLRALKQK GFSDRRLARQ FKTTDTAIRE KRIALGVRPV YKRVDTCAAE FETNTAYLYS
TYEAEGSECE AAPTDKKKIM VLGGGPNRIG QGIEFDYCCV HAAMAMREDG YETIMVNCNP
ETVSTDYDTS DRLYFEPLTL EDVLEIVDKE KPFGVIVQYG GQTPLKLALD LEANGVPIIG
TSPDMIDAAE DRERFQKLLH ALELRQPPNA TARTEPEALE KAAALGYPLV VRPSYVLGGR
AMEIVHEQRD LERYMREAVK VSHDSPVLLD RFLNDAIECD VDCIRDAEGK TFIGGVMEHI
EQAGVHSGDS ACSLPPYSLS AATVTEIKRQ TAAMAEALNV VGLMNVQFAI QNIDGLDVIY
VLEVNPRASR TVPFVSKATG IQLAKVAARC MVGQSLASQG VVNEVTPPYF SVKEAVFPFV
KFPGVDTILG PEMKSTGEVM GVGKTFGEAF VKSQIGAGTR LPTSGKVFLT VKNNDKARAV
EVARALAELK FELVATKGTA AAINAAGIAC GVVNKVTEGR PHVVDMIKNN GIALVINTVE
ERRNAIADSR QIRTSALLAR VTTFTTIAGA EAAVEGMKYL DNLSVYSIQE LHAQLAAQAA
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