| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1766 |
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| Symbol | |
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| ID | 4687264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1875718 |
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| End bp | 1878018 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639834772 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_981997 |
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| Protein GI | 121604668 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0726033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0207518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGC AATTCAATCA ATTCAAAGTT CGTGCTGTCT GCGCCATCGC CGCCGGTCTG
TTTTTCGCCA ATGCGGCCTG GGCCGTCGAT CCTTTCACCG TCAGGGATAT CCGGGTTGAG
GGCCTGCAAC GCGTCGAACC CGGCACCATC TTTGCCTCGC TGCCATTTCG CGTCGGTGAA
ACCTATAGCG ATGACAAAGG AACCAGTGCC ATTCGCGCAT TGTTCGGCCT GGGCCTGTTC
AAGGATGTGC GGCTTGAAGT CAGTGGCGAC GTGCTGGTCG TGATTGTCGA AGAGCGTCCT
ACCGTGGCCG ATGTGGACTT TGTCGGCACC AAGGAGTTTG ACAAGGACGT GCTGAAAAAG
GCGCTTCGCG ACGCCGGTAT CGCCGATGGC CAGCCGTTTG ACAAGGCGCT TGCCGATAAG
GCCGAGCAGG AACTCAAGCG CCAGTACATC AACAAGAGCC TGTACGGTGT CGAGATCATC
ACCACCGTGA CCCCGATTGA GCGCAACCGC GTCAACCTGA CCTTCAGCGT TGTCGAGGGC
GATGTCGCAA AAATCAATGA AATCCACATC ACCGGCAACA AGGCCTTCAG CGAATCAACG
CTGCTCGGCC TGTTTGATCT GGATACCGGG GGCTGGCTGA GCTGGTACAC CAAGTCCGAC
CGCTATTCGC GCACCAAGCT GAATGCGGAC ATTGAAACGC TGCGTTCCTA TTACCTGTCG
CGCGGCTACC TGGAGTTCAA GGTCGATACC ACCCAGGTGG CGATTTCTCC TGACAAGCAG
AACATTGCGA TCACCCTGAA CGTCACCGAA GGTGAGCGTT TTGTCGTCTC TGGCGTCAAG
CTCGAAGGTA ATTACCTGGG CAAAGAAGAC GAGTTCAAGT CACTGGTGAC CATCAAGCCC
GGCGAACCCT ACAACGCCGA TGCGGTGGCT GAAACCACCA AGGCCTTTAC CGACTATTTT
GGTGTTTTCG GATTTGCCTT TGCGAAGGTC GAAGCTGTAC CGCAAATTGA CCGCAGCAAC
AACCGCGTGG CCTTCGTGCT GCAGGCAGAA CCTTCGCGCC GGGCTTATGT GCGGCGCATC
AATGTATCGG GGAACAACCG GACACGCGAC GAAGTCGTGC GCCGCGAGTT TCGCCAGTTC
GAGTCGTCAT GGTATGACGG CGACAAGATC CGCCTTTCCC GCGACCGGGT TGACCGCCTG
GGATTCTTTA CCGAAGTGAA TGTGGAGACG CAGGAAGTCA CGGGCACGTC CGACCAGGTT
GACATCACGG TCAATGTGGC CGAAAAGCCG ACCGGCAATC TGCAGCTGGG CGCCGGCTAT
TCCAGTGCGG ACAGCGTCTC CCTGATGTTC GGCATCAAGC AGGAAAACGT GTTCGGCTCG
GGCAACTACC TCGGTATCGA AGTCAACACC AGCAAATCGA ATCGGCAACT GGTGTTGAGC
ACGATTGACC CTTATTTCAC CGCTGATGGC ATTTCACGCT CGATTGATGT CTATGACCGG
ACCTCCCAGC CGCTGTCAGG GCAGGGCGGC GATTACAAAC TGAAAACCCG GGGCGCCAGC
ATCCGCTTTG GCGTGCCGTT TACCGAGACC GACACGGTTT ATTTTGGTTC CGGTTACGAG
TCGCTGACGA TTGTTCCGGG CACCAACCTT CCGGTCAGCT ACCTGGACTA TGCCAACCAG
TTCGGCTTCA AGAGCAACTC GATCCCGCTG ACCGTCGGCT GGTCCCGCGA CAGCCGTGAC
AGTGCATTGG TGCCCACGTC AGGGCGATAC CAGAAGGTCT ATGCCGACTG GGGCATTGCC
GGTGACATCA AGTTCGTTCG CGCCAATTAC CAGATCCAGC AATACATTCC CATCAACAAG
CAGTTCACGC TGGCCTTGAA CGGTGAACTG GGCTGGGGCA AGGGCCTGAA TGGCCAGCCT
TACCCGCTGT TCAAGAATTA TTATTCTGGT GGTCTGGGTT CGGTTCGCGG TTTCCAGCAG
GGTTCGCTGG GGCCGCGCGA TTCCTCGGAC CTGTCGGTGG GCGCGCCCAA GAAGCTGACG
CTCAATGCCG AGTTGATTGC ACCGTTTCCA GGTGCCGGAA ATGACCGTAC CTTGCGTATG
TACGGTTTTG TCGATGCCGG CAACGTATTC AAGGACAGCT ACAAACTGAG CGGCCCGGAT
GGCCTCAGGG CTTCTACAGG CCTGGGCATC AGCTGGATTT CTCCAGTCGG ACCGCTTCGC
ATTGCCTATG CAGTGCCTTT GCGTAAACAA GCGGGCGATA AAATCGAACG CCTCCAATTT
CAAATCGGTA CCTCTTTCTA A
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| Protein sequence | MQKQFNQFKV RAVCAIAAGL FFANAAWAVD PFTVRDIRVE GLQRVEPGTI FASLPFRVGE
TYSDDKGTSA IRALFGLGLF KDVRLEVSGD VLVVIVEERP TVADVDFVGT KEFDKDVLKK
ALRDAGIADG QPFDKALADK AEQELKRQYI NKSLYGVEII TTVTPIERNR VNLTFSVVEG
DVAKINEIHI TGNKAFSEST LLGLFDLDTG GWLSWYTKSD RYSRTKLNAD IETLRSYYLS
RGYLEFKVDT TQVAISPDKQ NIAITLNVTE GERFVVSGVK LEGNYLGKED EFKSLVTIKP
GEPYNADAVA ETTKAFTDYF GVFGFAFAKV EAVPQIDRSN NRVAFVLQAE PSRRAYVRRI
NVSGNNRTRD EVVRREFRQF ESSWYDGDKI RLSRDRVDRL GFFTEVNVET QEVTGTSDQV
DITVNVAEKP TGNLQLGAGY SSADSVSLMF GIKQENVFGS GNYLGIEVNT SKSNRQLVLS
TIDPYFTADG ISRSIDVYDR TSQPLSGQGG DYKLKTRGAS IRFGVPFTET DTVYFGSGYE
SLTIVPGTNL PVSYLDYANQ FGFKSNSIPL TVGWSRDSRD SALVPTSGRY QKVYADWGIA
GDIKFVRANY QIQQYIPINK QFTLALNGEL GWGKGLNGQP YPLFKNYYSG GLGSVRGFQQ
GSLGPRDSSD LSVGAPKKLT LNAELIAPFP GAGNDRTLRM YGFVDAGNVF KDSYKLSGPD
GLRASTGLGI SWISPVGPLR IAYAVPLRKQ AGDKIERLQF QIGTSF
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