Gene Pnap_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1754 
Symbol 
ID4686352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1864249 
End bp1864728 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID639834760 
Producttransposase 
Protein accessionYP_981985 
Protein GI121604656 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.356095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.53027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCT CAGGAAAAGC TCCGCATGAC CGCTGCATAC TTGTTTTGGC CAGCAGAATG 
ACTCAAGAAC GACATAGCTT CACCGATGAG CAGTGGCAGC GTATTGAGCC GCTGCTGCCA
CCTTGCAAGG GCCGTCCCGG AGGCGAGCAA AGGATCTTCT TCAATGCACT GCTGTGGATG
GCCCGCACGG GCGCCGCGTG GCGTGACCTG CCCGAGCGGT TGGGGAAATG GAATGTGGTT
TACCAGCGCT ACGCCTATTG GTGCGACAAA GGACATTTCG AGCGCCTTTT CCAGGGCGTG
CAGCAGCCTG ACCTGGACGA AGTCATGGTG GACTCGACCT GCTGCCGGGC GCATCAATCA
TCGGCAGGAG CGCGCAAAAC CAGCGGTCCA CAAGCCATTG GCATCACGCA CGGCGGGCTC
AACTACCCAA AATTCACGCA GTCTGCGACG CCTTGGGAAA CCCACTGCGC TTTGTACTGA
 
Protein sequence
MQPSGKAPHD RCILVLASRM TQERHSFTDE QWQRIEPLLP PCKGRPGGEQ RIFFNALLWM 
ARTGAAWRDL PERLGKWNVV YQRYAYWCDK GHFERLFQGV QQPDLDEVMV DSTCCRAHQS
SAGARKTSGP QAIGITHGGL NYPKFTQSAT PWETHCALY