Gene Pnap_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1752 
Symbol 
ID4687228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1862292 
End bp1863629 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID639834758 
Producthypothetical protein 
Protein accessionYP_981983 
Protein GI121604654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.227885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.59787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGG GCGATGAAGA GTTCAAGACG ATCGAACTGG GCGATGAGCG CCTGAACCGG 
CGCGCCGTGC TGCTGGCAGA GCGACTGGGG CAAAAGCCCT CGGCCAGCAT TCCCGGCGCT
TGCCAGAGTT GGGCAGAAAC GGCAGCGGCT TACCGGTTTT TGTGCAACGA AGAGGTGAGC
TGGGACAAGG TGCTCGCGCC CCACTTGCAG GCCAGCCAGG CGCGCATGGC ACAGCACCAA
GTGGTGCTGT GCCTTCAGGA CACAACCGAG CTGGACTACC ACGGACAGGA CATCGAGGGT
CTGGGGCCCT TGAACTACGA GGCCCAGCGC GGGCTGTATT TGCACCCCAC CTATGTTGTG
AGTCCTGAGC GCGAGCCGCT GGGCGTATTC AATGCCTGGA CGTGGGCGCG CGAATTCAAG
GCAGCAGACG GCAAGCGCGG CGGGCCGTGC GAAAGCACCC GCTGGATTGA GAGCTACGAG
CGAATCGCTG AGAGTGCCCA GCAGCTGCCC CAAACGCGCC ATGTGTGCAT CGGCGACCGC
GAGTCGGACA TGCTGGAGTT GATGGTCAAG GCGCGGGACT TGGGCTACCC GGCCGACTAC
CTGGTGCGCA GCCAGCACAA CCGGGTGCTG CCGGGCGGGG ACAAGCTGTG GGACCGGGTG
ATGGTGCAAA CTTCTCTGGG GCGCATCCGC TTCATGCTGC CAGCCGGGCG GGGCCGAAAG
AGCCGCACGG TCGAGCAGGA CATCCGCATT GAGCGCGTCC AGCTGAGCGA CAGGGACAAG
GGAGTCATCG AGGTCAGCTG CCTGGTGGCC TCGGAGGTCA ACGCCCCGGC AGGCGTCAAG
CCCGTGGTCT GGCGGCTGCT GAGCAACCGC GTGGCCAGCA CACTGGAACA GGCCAGCGAG
CTGATCGACT GGTACCGCTC GCGCTGGGAA ATCGAGCTTT TTTTCTTGAT TCTCAAGGAG
GGCTGCCGAG TCGAGCGGCT GCAGCTGAGC GACAAAGACC GGCTGGAGTC AGCGCTGGCG
ATATACCTGG TCATTGCCTG GCGCATCAAC CGCTTGATGC GGCTGGGGCG CACGGTGCCC
GAGCTCGATG CCGAACTGGT GTTTGAGCCC GACGAGTGGC GTGCGGCGTA CATCCTGAAC
AAAAAGCCGA TACCGAAAAA GATGCCCGGA CTCAACGAAG TCATCCGGCT GATTGCCCGG
CGAGGCGGGT TTTTGGGGCG AAAAGGCGAT GGTGAGCCCG GTGCCAGAAC GCTATGGTTG
GGCCTGCAGG AAATTGCCGT CTTCGTGGAA GGTGCCCGCT ACGCCAGGAG CTACAGCGAA
ACGGGGATTT GTGTGTAA
 
Protein sequence
MGWGDEEFKT IELGDERLNR RAVLLAERLG QKPSASIPGA CQSWAETAAA YRFLCNEEVS 
WDKVLAPHLQ ASQARMAQHQ VVLCLQDTTE LDYHGQDIEG LGPLNYEAQR GLYLHPTYVV
SPEREPLGVF NAWTWAREFK AADGKRGGPC ESTRWIESYE RIAESAQQLP QTRHVCIGDR
ESDMLELMVK ARDLGYPADY LVRSQHNRVL PGGDKLWDRV MVQTSLGRIR FMLPAGRGRK
SRTVEQDIRI ERVQLSDRDK GVIEVSCLVA SEVNAPAGVK PVVWRLLSNR VASTLEQASE
LIDWYRSRWE IELFFLILKE GCRVERLQLS DKDRLESALA IYLVIAWRIN RLMRLGRTVP
ELDAELVFEP DEWRAAYILN KKPIPKKMPG LNEVIRLIAR RGGFLGRKGD GEPGARTLWL
GLQEIAVFVE GARYARSYSE TGICV