Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1750 |
Symbol | |
ID | 4689775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1859498 |
End bp | 1860886 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639834756 |
Product | integrase catalytic subunit |
Protein accession | YP_981981 |
Protein GI | 121604652 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTATG CGCGTTCGAA GCCGAAGTAT TTGGACGAGC AGAAGAAAGT AGCCGCCCGG CACTACCTGG ACCATGGTCG ATGCCTTGCT GCTACTTTGA AGGCACTGGG ATACCCGAGC CGCGAAACGC TCGCAGCCTG GGTCGACGAG CTGTACCCTG AAACAAAGCA CCCCGTCATC GGAAAAGCTC GGAGCGTACC GCGTCCTCCA GAGCTCAAGC AGGCGGCCGT CATTGAGCTT TGTACCAGGC AGACAAGTGC CCAGGCCATT GCACAAAAGC TCGCCGTGAG CAGGGGCGTG CTGTACAAAT GGAAAAACCA ACTCCTGGGT CCTGAGGCAC CCGCATCCAT GAAACCCAAC AACGATTCAC CGCCAGATCC TGAGCGGGCA GAACTGGAGC GGCAAGTCCA ATCGCTTCAA CGCGACATCC GCAAATTGCA GCTTGAGCAC GACCTCTTGA AGAAGGCGAA TGAACTGTTA AAAAAAGGCC TGGGCGTCGA CCTGCCTCTC CTGAGCAACC AGGAGAAGAC GCGGCTGGTT GATGCCCTGA AACAGCTCTA TTCGCTATCA GAACTCTTTG CCGAACTTGA TTTGGCCCGA AGCTCCTACT TTTACCATCG GGCACGGCTA CGGGCCGCTG ACAAGTATGG TGGCGTACGT CGCACCATCG CAGACATCTT CGCGCTCAAT CACTGCTGCT ACGGCTATCG CCGGATACAG GCGTCACTGG GCAGACAGCA CGTCTTTATC TCGGAAAAAG TCGTGCGGCG TTTGATGAGA CAGGAATGCC TGGTCGTTGC CGCGAAGAGG CGGCGCCGGT ACGGCTCCTA CCTGGGAGAA ATCAGCCCAG CGCCAGACAA TCTCATCAAC CGCGACTTCC AGGCGGCTGC CCCGAATGAG AAATGGCTCA CTGACATCAC GGAGTTCCAG ATCGCTGCTG GCAAGGTGTA CCTGTCGCCC ATCATCGACT GCTTCGATGG CTTGGTTGTC AGCTGGACAG TTGGCACGCG TCCAGATGCC CAGCTTGTGA ACACGATGTT GGACGCTGCC ATTGAGACGC TGGCCAACAG CAATGATCGG CCGGTCGTCC ACTCGGATCG CGGTGCGCAC TACCGCTGGC CTGGATGGCT CTCGCGGATG CACAATGCGA AGCTGATCCG CTCGATGTCG CGCAAAGGAT GCTCGCCCGA CAATGCGGCC TGTGAGGGCT TCTTCGGGCG GCTGAAAACA GAGCTGTTCT ATCCCCGGGA CTGGCAGGCC ACGACCATTG AGCAGTTCAT TCAGGCAGTT GACGCCTACA TCCGCTGGTA TAACGAAAAG CGCATCAAGA TTTCCCTTGG CTCGCTCAGT CCCGCCGAAT ACCGAGAGAG CCTCGGACTT ATGGCATAA
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Protein sequence | MGYARSKPKY LDEQKKVAAR HYLDHGRCLA ATLKALGYPS RETLAAWVDE LYPETKHPVI GKARSVPRPP ELKQAAVIEL CTRQTSAQAI AQKLAVSRGV LYKWKNQLLG PEAPASMKPN NDSPPDPERA ELERQVQSLQ RDIRKLQLEH DLLKKANELL KKGLGVDLPL LSNQEKTRLV DALKQLYSLS ELFAELDLAR SSYFYHRARL RAADKYGGVR RTIADIFALN HCCYGYRRIQ ASLGRQHVFI SEKVVRRLMR QECLVVAAKR RRRYGSYLGE ISPAPDNLIN RDFQAAAPNE KWLTDITEFQ IAAGKVYLSP IIDCFDGLVV SWTVGTRPDA QLVNTMLDAA IETLANSNDR PVVHSDRGAH YRWPGWLSRM HNAKLIRSMS RKGCSPDNAA CEGFFGRLKT ELFYPRDWQA TTIEQFIQAV DAYIRWYNEK RIKISLGSLS PAEYRESLGL MA
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