Gene Pnap_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1750 
Symbol 
ID4689775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1859498 
End bp1860886 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content58% 
IMG OID639834756 
Productintegrase catalytic subunit 
Protein accessionYP_981981 
Protein GI121604652 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTATG CGCGTTCGAA GCCGAAGTAT TTGGACGAGC AGAAGAAAGT AGCCGCCCGG 
CACTACCTGG ACCATGGTCG ATGCCTTGCT GCTACTTTGA AGGCACTGGG ATACCCGAGC
CGCGAAACGC TCGCAGCCTG GGTCGACGAG CTGTACCCTG AAACAAAGCA CCCCGTCATC
GGAAAAGCTC GGAGCGTACC GCGTCCTCCA GAGCTCAAGC AGGCGGCCGT CATTGAGCTT
TGTACCAGGC AGACAAGTGC CCAGGCCATT GCACAAAAGC TCGCCGTGAG CAGGGGCGTG
CTGTACAAAT GGAAAAACCA ACTCCTGGGT CCTGAGGCAC CCGCATCCAT GAAACCCAAC
AACGATTCAC CGCCAGATCC TGAGCGGGCA GAACTGGAGC GGCAAGTCCA ATCGCTTCAA
CGCGACATCC GCAAATTGCA GCTTGAGCAC GACCTCTTGA AGAAGGCGAA TGAACTGTTA
AAAAAAGGCC TGGGCGTCGA CCTGCCTCTC CTGAGCAACC AGGAGAAGAC GCGGCTGGTT
GATGCCCTGA AACAGCTCTA TTCGCTATCA GAACTCTTTG CCGAACTTGA TTTGGCCCGA
AGCTCCTACT TTTACCATCG GGCACGGCTA CGGGCCGCTG ACAAGTATGG TGGCGTACGT
CGCACCATCG CAGACATCTT CGCGCTCAAT CACTGCTGCT ACGGCTATCG CCGGATACAG
GCGTCACTGG GCAGACAGCA CGTCTTTATC TCGGAAAAAG TCGTGCGGCG TTTGATGAGA
CAGGAATGCC TGGTCGTTGC CGCGAAGAGG CGGCGCCGGT ACGGCTCCTA CCTGGGAGAA
ATCAGCCCAG CGCCAGACAA TCTCATCAAC CGCGACTTCC AGGCGGCTGC CCCGAATGAG
AAATGGCTCA CTGACATCAC GGAGTTCCAG ATCGCTGCTG GCAAGGTGTA CCTGTCGCCC
ATCATCGACT GCTTCGATGG CTTGGTTGTC AGCTGGACAG TTGGCACGCG TCCAGATGCC
CAGCTTGTGA ACACGATGTT GGACGCTGCC ATTGAGACGC TGGCCAACAG CAATGATCGG
CCGGTCGTCC ACTCGGATCG CGGTGCGCAC TACCGCTGGC CTGGATGGCT CTCGCGGATG
CACAATGCGA AGCTGATCCG CTCGATGTCG CGCAAAGGAT GCTCGCCCGA CAATGCGGCC
TGTGAGGGCT TCTTCGGGCG GCTGAAAACA GAGCTGTTCT ATCCCCGGGA CTGGCAGGCC
ACGACCATTG AGCAGTTCAT TCAGGCAGTT GACGCCTACA TCCGCTGGTA TAACGAAAAG
CGCATCAAGA TTTCCCTTGG CTCGCTCAGT CCCGCCGAAT ACCGAGAGAG CCTCGGACTT
ATGGCATAA
 
Protein sequence
MGYARSKPKY LDEQKKVAAR HYLDHGRCLA ATLKALGYPS RETLAAWVDE LYPETKHPVI 
GKARSVPRPP ELKQAAVIEL CTRQTSAQAI AQKLAVSRGV LYKWKNQLLG PEAPASMKPN
NDSPPDPERA ELERQVQSLQ RDIRKLQLEH DLLKKANELL KKGLGVDLPL LSNQEKTRLV
DALKQLYSLS ELFAELDLAR SSYFYHRARL RAADKYGGVR RTIADIFALN HCCYGYRRIQ
ASLGRQHVFI SEKVVRRLMR QECLVVAAKR RRRYGSYLGE ISPAPDNLIN RDFQAAAPNE
KWLTDITEFQ IAAGKVYLSP IIDCFDGLVV SWTVGTRPDA QLVNTMLDAA IETLANSNDR
PVVHSDRGAH YRWPGWLSRM HNAKLIRSMS RKGCSPDNAA CEGFFGRLKT ELFYPRDWQA
TTIEQFIQAV DAYIRWYNEK RIKISLGSLS PAEYRESLGL MA