| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1744 |
|---|
| Symbol | |
|---|
| ID | 4689282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1846260 |
|---|
| End bp | 1847615 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639834745 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_981975 |
|---|
| Protein GI | 121604646 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5659] FOG: Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.865016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.814696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCG TGATTCCTGT CAGAACCAAT TGGCCTGAAG ATTTTCAGGA ATGGCTCCAG
CCGTTCCTGG CCGTTTTCAC ACGTTCCGAG CAGCGCTGCT GGGCACCTCT CTACCTGCAA
GGACTCCTGG GGCCGGGCGC GCGCAAAAGT GTCGCACCCA TGGCTGAACG TGTGTGTCCC
GGTCAGACGC AGCAACTCCA CCATTTTGTG TCGTCATCGA CTTGGTCCAC CGCTCCGCTG
GAACAGGTGC TGCGCAAGAA GGCTGACGCT TTGGTAGGCG GCAAGGACGC TGTGCTGATC
GTGGACGACA CGGCGCTACC CAAGCAGGGC AAGCACTCGG TAGGGGTCAA GCGCCAACAC
TGCGGCGTAC TCGGTAAGCA GGCTAACTGC CAGGTATTGG TATCGCTCAC CTTAGCGCGC
AAGGAAGTGC CAGTGCCGAT CGCCCTGCGG CTGTACTTGC CCGAAGATTG GGCACAGGAC
GAAGCGCGTC GTGCAGCAGC CAAGGTACCC GAGTCGATTA CGTTCGAGAC CAAGGGTGAC
ATCGCGCTGG CGCAGATCGA TGCCGCGCTG GCTGACGGCG TGCGCTTTGG CATGGTGCTG
GCCGATGCCG GCTATGGCAG TTCGGCAGGC TTTCGCGCTG GGCTTACGCA GCGAGGGCTA
CGATGGGCAG TGGGCGTGCA GCCCACGCAG AAGGTCTATC CAGCTGATGT GCGGCTCGAT
GTGCCGGCCG ATCCCCCGGT GGGGCGCCCC GCCAAGCACC CAAGACCTTC GACGCCGAGC
GTGTCCGTCG TGCAGATGAT TGAAACGTTG GGTTCCAAGG CCCTGCGGCG CTGTTCCTGG
CGCAGCGGCA CCAAGGGCAT GCTCAGCGCA CGCTTTGCTG CTGTGTGGGT GTGCGTTGCT
GACGGCGCGC TGGTATCGCA TTGGCAGCAT CTTCCGGGGC AAGCCGCATG GCTGGTGTGC
GAAGTGCGCT CCAGTGGCGA GCGCAAGTAT TACTTTACTA ACCATCCGGC TGACACGCCG
CGCAGGACGC TGGTACGCGC GATCAAGGCC CGCTGGGCGT GCGAGCAGGC GCATCAGCAA
CTCAAGGATG AACTTGGCCT GGACCATTAC GAAGGCAGAT CCTGGCTGGG ACTGCACCAT
CACGCGCTGC TGACCATGAT GGCTTTTGGT TATCTGCAGC ACCGACGTCT GGACAGTGTT
TTGCAAGCGG GAAAAAAAAC TGGCATCCAA TGCACCGGGA CCGCCACCGC AACCATCATT
GCCAGCGGTA CGCCGGGCCA TTCTCGCCGC GCTTTGTCGG GTAATTTGCG TTCAGTGTCC
TCATTGCGGC GCCACGATAA ACCTGCGTCA GCGTGA
|
|---|
| Protein sequence | MDTVIPVRTN WPEDFQEWLQ PFLAVFTRSE QRCWAPLYLQ GLLGPGARKS VAPMAERVCP
GQTQQLHHFV SSSTWSTAPL EQVLRKKADA LVGGKDAVLI VDDTALPKQG KHSVGVKRQH
CGVLGKQANC QVLVSLTLAR KEVPVPIALR LYLPEDWAQD EARRAAAKVP ESITFETKGD
IALAQIDAAL ADGVRFGMVL ADAGYGSSAG FRAGLTQRGL RWAVGVQPTQ KVYPADVRLD
VPADPPVGRP AKHPRPSTPS VSVVQMIETL GSKALRRCSW RSGTKGMLSA RFAAVWVCVA
DGALVSHWQH LPGQAAWLVC EVRSSGERKY YFTNHPADTP RRTLVRAIKA RWACEQAHQQ
LKDELGLDHY EGRSWLGLHH HALLTMMAFG YLQHRRLDSV LQAGKKTGIQ CTGTATATII
ASGTPGHSRR ALSGNLRSVS SLRRHDKPAS A
|
|---|
| |