Gene Pnap_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1737 
Symbol 
ID4686675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1839973 
End bp1841184 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content53% 
IMG OID639834740 
Productglycosyl transferase, group 1 
Protein accessionYP_981970 
Protein GI121604641 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.75946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC CGCTTTCAAG CTCTGCCACG CATTTGAACA GCGACAAAAG AAGATTGCGT 
ATCGCGGTTT TGAACCGGAC TTTTTCGACG GCAGGCGGTG GCGCAGAGCG CTATTCCATT
TCGCTGGTGG AGCAGCTGGC GGCAAGGCAT GAGATTCATG TGTTTGCACA GAAAATAGAC
CATCAGTGGC CTGGGATCAT TTATCACCGC GTTTCTGCAC CGCTGCTTAA ACCGCGATGG
ATCAATCAGT TGTGGTTCGC CACCCGTACC TGGTGGTTGA CCCGACACGG TTTTGACATC
GTGCATTCGC ATGAAAACAC ATGGCACGGT GATGTTCAGA CGGTGCATGT CCTGCCGGTA
AAGTACAACC TGTTTCATGA TCGCAAGGGT GGACGGCGGG CTTTGCGCTG GGTCAAGGTG
GTCACGAGTC CGCGCCTGCT GGCTTATCTG GGCCTTGAGC ACTTCAGGTA TGCCATCCGT
CAGGGCCGGC AAGTGGTCGT CACCTCTGAC TACCTGCGCG CCATCATGGA ATCCAGCTAC
CCGGTCTGCA CAGAAATGAT TTCGGTGATT ACTCCGGGCA TCACGATGCC GCAGTTGCCG
GTAACGAAAC TGCGCAAGGA TGCGGCAAGG GCGTTATTGG GTCTGCCGCT CGCTGGGTAT
TGCATCTTGT TTGTCGCCAA CGATTACCGG AAAAAAGGCC TTGCAACCTT GCTGAAGGCG
CTGGCGCAGT TTCCTGGCGA ATTCACGCTG GCGGTGGTGG GAAATCAGTC ACAGCTGTCC
TTCTTCAAAG AGCAGGTGAA AACATTCAAC CTGGAAAAGC GTGTTTTCTT TCTAGGTTCG
CTTAAAAATG TTGCACCTGC CTATGAAGCT GCCGATTGCC TGGTCCATCC TTCGCTTGAA
GACACTTTCG CCATGGTCGT TCTGGAAGCC ATGTCATATG GCTTGCCTGT AGTCGTTAGT
GGGCCTAAAT ACTGTGGCAT TTCAGGTTTG CTGCAGCATG GCATGAATGC CCTAATTCTT
GATAGCCCTA CAGATGAATC CCAGTTGCAG CATGCTCTTG AATTGGTTCT GACCCAACCC
GCGCTACGAA ATCAGTTGAG TCAAGGGGCG AAGGATTTCG CTAGCTCCTA CCAGTGGCGT
AAGCTGGTCC TGAAGCAGGA GTCGCTTTAC CACTCAGTGC TTGCAAGTAA AAACGCTGTC
AACGCTCAGT GA
 
Protein sequence
MSSPLSSSAT HLNSDKRRLR IAVLNRTFST AGGGAERYSI SLVEQLAARH EIHVFAQKID 
HQWPGIIYHR VSAPLLKPRW INQLWFATRT WWLTRHGFDI VHSHENTWHG DVQTVHVLPV
KYNLFHDRKG GRRALRWVKV VTSPRLLAYL GLEHFRYAIR QGRQVVVTSD YLRAIMESSY
PVCTEMISVI TPGITMPQLP VTKLRKDAAR ALLGLPLAGY CILFVANDYR KKGLATLLKA
LAQFPGEFTL AVVGNQSQLS FFKEQVKTFN LEKRVFFLGS LKNVAPAYEA ADCLVHPSLE
DTFAMVVLEA MSYGLPVVVS GPKYCGISGL LQHGMNALIL DSPTDESQLQ HALELVLTQP
ALRNQLSQGA KDFASSYQWR KLVLKQESLY HSVLASKNAV NAQ