| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1735 |
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| Symbol | |
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| ID | 4687518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1837708 |
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| End bp | 1839207 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639834738 |
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| Product | ribonuclease |
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| Protein accession | YP_981968 |
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| Protein GI | 121604639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.776298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAG AGATACTGAT TAACTGGTCG CCGCAGGAGA CGCGGGTTGC CGTGGTGGAG
CATGCGGCCG TGCAGGAGTT GCAGGTTGAA CGCACGCTTG AGCGTGGCTT GGTCGGGAAT
GTTTATCTTG GCAAGGTGGT GCGGGTGCTA CCGGGAATGC AGTCTGCGTT CATCGACATA
GGCTTGGACC GCGCCGCATT TCTGCATGTT GCCGACTTGA TGAGCAGCAT CAATAGTCGC
CATGTAGAAA CCGAGTTGCG GGCAGACGGT ACATCGATAT TGCCGGCGGC TTCATCGCTT
CGGCCGATTG AAAAGCAGTT GTTCGAGGGA CAGGCTGTGA TGGTGCAGGT TCTCAAGGAT
CCAATGGGCA CCAAGGGGGC TCGACTGACA GCGCAAATCA GCATCGCTGG CCGTTTGCTG
GTCTTTTTGC CCCAGGATAA TCACATTGGC GTGTCGCAAA AAATTCCGCC CCGGCAGCGC
GAAGACTTGC GTCAACGTGT CCAGACTCTG GTGGGTGATA TGGGCGGGGG CTTTATCCTT
CGCACGAATG GGGAGGAGGC TACTGACACG GAGTTGGCCG AGGACATCGC TTATTTAAGG
AAAACCTGGA TACGCATCAA GGAAGCCTCA TTGCGCTTGC CTGCCACGTC GGTTTTGCAT
CAGGATCTGA GTCTGCTGCA GCGTGTATTG CGTGATATGG TGCTGGAAAA TACGCAAACC
ATCCGCATTG ATTCCCGTGA GCAGTTTGAA AAACTGAAAG CTTTTGCGGT GGAGTTCATG
CCTTCAACGG TGCCAAAACT TCAGCTTTAC AGCGGTGAAC GGCCTATTTT TGACCTTTTC
AATATTGACG AAGAAATTGC AAAAGCGCTG GGTCGCAGGG TGGACCTCAA ATCAGGCGGC
TATCTGGTCA TTGACCAGAC GGAAGCCTTG ACCACTATTG ATGTGAATAC GGGCGGATTT
GTTGGCGCCC GCAATTTCGA AGAAACCATT TACAAAACCA ATCTTGAGGC CGCTCAAGCA
ATTGCCCGGC AACTTCGCCT GCGTAATCTG GGCGGTATTG TGATTGTCGA TTTTATCGAC
ATGAGCAAGG AAAACCACCG TGATGCGGTA CTGGCCGAGT TCAAAAGGCA ACTGGCGCGG
GATCGCATCA AGACAGCGGT CAATGGATTT TCGGCGTTGG GATTGCTCGA AATGACGCGC
AAGCGGACCC GGGAGTCACT GGCGCATCAA CTGTGCGAAC CTTGCAGTGC CTGTACTGGC
AAAGGCATTG TCAAAACAGC CCGCAGCGTG ACCTATGACA TCCTGCGTGA AATTTTGCGC
GAAGCGCGGC AGTTCAATCC ACGCGAGTTC AGGATAGTGG CTTCGCCCAA AGTGATTGAG
TTGTTTCTGG ATGAGGAAAG CCAGCACCTG GCAAGCCTGA GCGACTTCAT TGGAAAGCCC
ATTTCATTGC AGGCTGAAGC GGTCATGGCA CAAGAACAAT ACGATATCGT GTTGTTGTGA
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| Protein sequence | MQQEILINWS PQETRVAVVE HAAVQELQVE RTLERGLVGN VYLGKVVRVL PGMQSAFIDI
GLDRAAFLHV ADLMSSINSR HVETELRADG TSILPAASSL RPIEKQLFEG QAVMVQVLKD
PMGTKGARLT AQISIAGRLL VFLPQDNHIG VSQKIPPRQR EDLRQRVQTL VGDMGGGFIL
RTNGEEATDT ELAEDIAYLR KTWIRIKEAS LRLPATSVLH QDLSLLQRVL RDMVLENTQT
IRIDSREQFE KLKAFAVEFM PSTVPKLQLY SGERPIFDLF NIDEEIAKAL GRRVDLKSGG
YLVIDQTEAL TTIDVNTGGF VGARNFEETI YKTNLEAAQA IARQLRLRNL GGIVIVDFID
MSKENHRDAV LAEFKRQLAR DRIKTAVNGF SALGLLEMTR KRTRESLAHQ LCEPCSACTG
KGIVKTARSV TYDILREILR EARQFNPREF RIVASPKVIE LFLDEESQHL ASLSDFIGKP
ISLQAEAVMA QEQYDIVLL
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