| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1728 |
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| Symbol | |
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| ID | 4686940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1832364 |
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| End bp | 1833089 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834732 |
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| Product | hypothetical protein |
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| Protein accession | YP_981962 |
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| Protein GI | 121604633 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.359816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGGTC ATAGTAAATG GGCGAATATT CAGCACCGCA AGGGTCGCCA GGACGACAAA
CGCGGCAAGA TCTGGACGCG GGTCATCCGC GAGATCATGG TGGCCGCGCG TTTGGGCGGC
GGTGACTTGG CGACCAATCC ACGCTTGCGC CTGGCGGTCG AGAAGGCGAA GGCGGCCAAC
CTGGCGGCTG AAACCGTCAA GCGCAACATC GACAAGGCCA CGGGCAACCT CGAAGGCGTT
CACTACGAAG AAGTTCGTTA TGAAGGCTAT GGCATCGGCG GGGCGGCGAT TCTGGTGGAC
TGCATGACCG ACAACAAGGT TCGCACGGTG GCCGAAGTTC GCCATGCGTT TTCCAAGCAC
GGCGGTAACA TGGGCACCGA GGGTTCGGTG GTTTTCCAGT TCAAACACTG TGGCCAGTTG
ATTTTTGCGC CCGGCACGAG CGAAGACAAG GTCATGGAGG TGGCTTTGGA GGCCGGTGCC
GACGATGTGA TCGCGCATGA GGACGGTGCG ATTGAAGTGC TGACACCTTA CACCGAGCTT
GAAACCGTCA AGAACGCGCT GGAAGCGGCC GGCTTGACGC CGGAGCTGGC CGAAGTCACC
ATGCGCGCCG ACAACACGAT TGAACTGACG GGCGAAGATG CCCAGAAGAT GCAAAAGCTG
CTGGATGTGC TGGAAGACCT GGACGACACG CAGGAAGTCT TTCACAACGC CGAGCTTTCC
GAATAA
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| Protein sequence | MAGHSKWANI QHRKGRQDDK RGKIWTRVIR EIMVAARLGG GDLATNPRLR LAVEKAKAAN
LAAETVKRNI DKATGNLEGV HYEEVRYEGY GIGGAAILVD CMTDNKVRTV AEVRHAFSKH
GGNMGTEGSV VFQFKHCGQL IFAPGTSEDK VMEVALEAGA DDVIAHEDGA IEVLTPYTEL
ETVKNALEAA GLTPELAEVT MRADNTIELT GEDAQKMQKL LDVLEDLDDT QEVFHNAELS
E
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